Sequence detailsbmy_10550 (Coding sequence)

Part of scaffold_547 (SequenceType object (1))

For more information consult the page for scaffold_547 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LCTENSTTRG00000003952 (Bottlenosed dolphin)

Gene Details

lactase

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003721, Bottlenosed dolphin)

Protein Percentage 92.85%
cDNA percentage 94.14%
Ka/Ks Ratio 0.53492 (Ka = 0.0367, Ks = 0.0687)

LCTENSBTAG00000015170 (Cow)

Gene Details

lactase-phlorizin hydrolase precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020185, Cow)

Protein Percentage 86.52%
cDNA percentage 88.75%
Ka/Ks Ratio 0.27228 (Ka = 0.0788, Ks = 0.2894)

Additional orthologs identified in other species via the OPTIC pipeline.

LCT (Human)   Lct (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4926 bp    Location:537130..574746   Strand:+
Raw sequence 
>bmy_10550
ATGATCCTATTTACTTATTTCCAGGATGCAGTTGACTTCCTCTCTCTTGATTTATCTTATGAATGCCAAAGTGAGGCAGATTTCCGGCAGAAGCTGAGTAAATTGCAGACTATTGAGCCAAAAGTGAAAGTTTTCATCTTCAATCTGAAACTCCAGGACTGCCTCTCCACCAAGAAGAACCCATCTGATCTGTTCTTCAGCCTTCTCACAGCCATAAGTGAAGAACAAGTGCTCACCATTGGGTTTGATCTTAGTACATTCCTGAGCTGTTCATCAAGTTCCAAGAAAAGCAGGTCTTGTTCTCTGACTGACAACCTGACCCTCCAGACTGCCCTGCAGCTGGACCCGGAGACAGCAGTAGACTCCTCGCTGCCCCACTCGGCCTATCAGAGAGTCTGGGAAATGTTTGCCAACCAGTCCAGGGCAGAAAGGGATGCTTTCCTGCAGGATGTTTTTCCTGAGGGTTTCCTCTGGGGCGTCTCCACAGGGGCTTTTAATGTGGAAGGAGGCTGGGCCGAGGACGGAAGAGGGGCGAGCATCTGGGACAGAGTTGGGCACCAGAACACCGCCAAGGGCCAAGCAACGCCAGAGGTGGCCAGTGACAGTTACCACAAGGTGGACACTGACGTCGCCCTGCTTCGTGGCCTCCGGGCCCAGGTCTACAAGTTCTCCATCTCCTGGTCCCGCATCTTCCCCACTGGGCAGGGGCAGAGCCCCAACCTCCGGGGCGTCGCCTACTACAACATGCTGATCGACAGGCTGCTGGACTCGCACATTGAGCCCATGGCCACGCTGTCCCACTGGGACCTGCCTCAGGCCCTGCAGGATCGCGGCGGGTGGCAGAATGAGAGCGTGGTGGATGCCTTCCTGGACTATGCGGCCTTCTGCTTCTCCACGTTTGGGGACCGTGTGAAGCTGTGGGTGACCTTCCACGAGCCATGGGTGATGAGCTACGCGGGCTACGGCACCGGCCAACACGCACCGGGCATCTCCAGCCCAGGGGTGGCCTCTTTTAAGGTGGCTCACGTGGTCCTCAAGGCTCATGCCAGGGCTTGGCACCACTACAACAGCCAACATCGCCCACAGCAGCAGGGGCGGGTGGGCATTGTGCTGAACTCAGACTGGGCAGAGCCCCTGTCCCCAGAGAGGCCTGAGGACCGGAGAGCCTCTGAACGCTTCCTGCACTTCATGCTGGGCTGGTTTGCACACCCCATCTTTGTGGATGGAGACTACCCGGCTGCCCTGAGAGCCCAGATCCAACAGACGAACAAACAGTGCCCCACTCCTGTGGCCCAGCTCCCTAAGTTCACCGAGGCAGAGAAGCAGCTCCTGAAGGGCTCCGCTGACTTTCTGGGTCTGTCCCATTACACTTCCCGCCTCATCAGCAAGGCCCAAGGAGATACCTGTGTCCCCAGCTATGATACCATTGGAGGCTTCTCCCAACACGTGGACCCTGCGTGGCCCCAGACCGAATCCCCTTGGATTCGTGTGGTACCCTGGGGTATAAGGAGGCTGTTGCAGTTTGTATCCTTGGAATACACAAGAGGCAAAGTTCCAATCTACCTGGCTGGGAATGGCATGCCCATAGGGGAAAGTGAAGATCTCATCAATGATTCCTTGAGAATTGACTACTTCAATCAATATATCAATGAGGTGCTCAAGGCTGTCAAGGAGGACTCAGTGGATGTTCAATCTTACATTGCTCGTTCCCTCATCGACGGCTTCGAAGGCCCCTCTGGGTACAGCCAGAGGTTTGGGCTGTACCATGTCAACTTCAACGACAGCAGCAGGCCAAGGACTCCCAGGAAATCTGCCTACTTTTTCACCAGCATTATTGAAAAGAACGGTTTCCTCACCAAGGTAGTAAAAAGACTGCCACCAGCCAGTAAAGCAAACGTCCCCCGGAAAATCAGAGCCTTCACATTTCCATCCGAGGTGCCCTCCAAGGCTAAAGTAGTCTGGGAAAAGTTCTCCAACCAACCCAAGTTTGAAAGAGATTTGTTCTACCACGGCACATTCCGGGATGACTTCCTGTGGGGCGTGTCCTCGTCAGCCTATCAGATTGAAGGAGCTTGGGATGCTGATGGCAAAGGCCCCAGCATCTGGGATAATTTTACCCACACACCAGGGAGCAACGTGAAAGACAGTGCCACTGGAGACATAGCCTGTGACAGCTATAACCATCTGGATGCTGATCTGAATATGCTTCGAGCTTTGAAGGTGAAGGCCTATCGCTTCTCCATCTCCTGGTCTCGGATTTTCCCGACTGGAAGAAACACTTCTGTCAACACACGTGGTGTTGATTATTACAACAGGCTGATTGATGGCTTGGTGGCAAGCAGCATCTCTCCCATGGTGACACTGTTCCACTGGGACCTGCCCCAGGCCCTCCAGGATATTGGAGGCTGGGAGAATCCTTCCTTGATTGAGTTGTTTAACAGCTATGCAGACTTTTGTTTCCAGACCTTTGGTGACAGAGTCAAGTTCTGGATGACTTTTAACGACCCCACATACCAGGCCTGGTTGGGGTATGGCTCAGGGGAATTTCCCCCAAACGTGAACGACCCAGGCTGGGGACCTTACAGGATTGGCCATGCAATCATCAAAGCTCATGCCAGAGTCTATCACACTTACGATGAGAAGTACAGGCAAGAGCAGAAGGGGGTCATCTCTTTGAGCCTTGGTGCACACTGGGCAGAGCCCCAGTCGCCTGGGGTCCCCAGGGATGTGGAGGCAGCTGACCGAATGCTGCAGTTCTCACTGGGCTGGTTCGCCCACCCCATCTTCCGAAACGGAGACTATCCCGATGCCATGAAGTGGAAAGTGGGGAACAGGAGTGAACTGCAGCACTTAGCCACCTCCCGCCTGCCCAGCTTCACTGAGGAAGAGAAGAGGTACATCTCAGCTACAGCCGACGTGTTCTGCCTCAACACCTACTCCTCCAGAATCGTGCGGCATGCAACACCGAGGTTAAACCCACCCTCCTATGAAGATGACCGGGAGCTGACCGAGAGGGAGGACTCTTCCTGGCCCTCCACAGCAATGAACAGAGCTGCGTCCTGGGGGATGCGAAGACTGCTCAACTGGATCAAGGAGGAGTATGGGGGCGTCCCCATTTACATCACTGAAAACGGAGCAGGGCTGAAAGATCCGAAAGTGGAAGATACCAATAGGATATTTTACCACAAAACCTATATCAATGAAGCTTTGAAAGCTTACAGGCTCGATGGTGTCGACCTTCGAGGATATGCTGCATGGTCCCTGATGGACAGCTTTGAGTGGCTAAATGGCTACACGGTCAAGTTCGGACTGTACCATGTTAATTTCAATAACGTGAACAGGCCTCGCACAGCAAGAGCCTCTGCCAGGTACTACACGGAGACCATGTCTTGTCATCTTGAGATTGAAGGTGCGTGGAGAGCAGATGGCAAAGGGCTCAGTATTTGGGACACGTTTTCTCACACACCACTGAGGGTTGGGAATGATGACACTGGAGACGTGGCCTGTGACAGTTATCACAAGATTGCCGAGGATGTGGTCGCCCTGCAGAACCTGGGTGTGACCCACTATCGCTTTTCCATCTCTTGGACTCGCCTCCTCCCTGACGGAACTACCAAATACATCAATGAAGCAGGCCTGAACTACTACATGCGGCTCATCGACACGCTGCAGGCTGCCAGCATCCAGCCCCAGGTGACCATTTACCACTGGGACTTGCCGCAGGCACTCCAGGATGTCGGAGGCTGGGAGAATGAGACGGTTGTACAGCGGTTTAAGGAGTATGCAGATGTGCTCTTCCAGAGGCTGGGGGACAAGGTGAAGTTTTGGATCACACTGAACGAGCCCTATGTCATTGCTAACCTGGGCTATGGCTATGGGACAGCAGCTCCAGGGAGTAGCCAGCAGGACCCTCCTAAGGGCAGCCAGCCGCATCTGTCAAGTCCAGGGCCCATGCTCAAATCGGTTCACATCCCTCAAGCTACAGTGGGTGAGAACATCGCCCTGCCCACATTCATGGGAGGCTGGTTCGCACATCCGATTTTCAAGAATGGGGATTACCCCGAGGTGATGAAGACACGGGTTCGTGACAGGAGCTTGGCGGCAGGCCTCAACAAGTCTCGGCTCCCTGAGTTCACAGAGAGTGAGAAGAGGAGGATCAACGGCACCTATGACTTTTTTGGGTTCAATCACTACACCACTGTCCTGGCCTACGATATCAACTATGCCTCTTGGATCTCTTCCTTCGATGCAGACAGGGGAGTTGCCTCCGTCACAGATCGCTCTTGGCCAGACTCTGGCTCCTTCTGGCTGAAGATGACACCTTTCGGCTTCAGGAGGATCCTGAACTGGTTAAAGGAGGAGTACAACAACCCCCCGATCTACGTAACAGAAAATGGAGTGTCCCAGCGGGAAGAATCAGACCTCAACGACACTGCTAGGATCTATTACCTCCGCAGTTACATCAACGAGGCGCTCAAAGCTGTGCAGGATAAGGTGGACCTTCGAGGATACACGGTTTGGACTCTGATGGACAACTTTGAGTGGGCCACAGGCTTCGCAGAGAAGTTCGGTGTGCATTTCGTGAACTATACTGACACTTCTCTGCCAAGGATCCCCAAAGCGTCGGCCAAGTTCTACGCCTCCATAGTCCGGTGCAACGGCTTCCCTGACCCCGCTGCAGGGCCACACCCTTGTCTGCAGCAAGATGCTGAGCCCACCACCAGCCCCATGAGAGAAGAGGACGTTCAGTTCCTGGGGCTCAGGCTGGGTACAGCAGAGGCCCAGACAGCACTGTATGTACTCTTTGCTCTAATGCTGCTTGGAGTCTGTGGTGTGGCGTTTCTGTCCTACAAGTACTGTAAGCGCTCCAAGCAAAAGCAAACACAACCAGGTGAACAGGAATTGAGCTATAGTTCTTCATTCTGA

Related Sequences

bmy_10550T0 SequenceType object (3)

Length: 1642 aa      View alignments
>bmy_10550T0
MILFTYFQDAVDFLSLDLSYECQSEADFRQKLSKLQTIEPKVKVFIFNLKLQDCLSTKKNPSDLFFSLLTAISEEQVLTIGFDLSTFLSCSSSSKKSRSCSLTDNLTLQTALQLDPETAVDSSLPHSAYQRVWEMFANQSRAERDAFLQDVFPEGFLWGVSTGAFNVEGGWAEDGRGASIWDRVGHQNTAKGQATPEVASDSYHKVDTDVALLRGLRAQVYKFSISWSRIFPTGQGQSPNLRGVAYYNMLIDRLLDSHIEPMATLSHWDLPQALQDRGGWQNESVVDAFLDYAAFCFSTFGDRVKLWVTFHEPWVMSYAGYGTGQHAPGISSPGVASFKVAHVVLKAHARAWHHYNSQHRPQQQGRVGIVLNSDWAEPLSPERPEDRRASERFLHFMLGWFAHPIFVDGDYPAALRAQIQQTNKQCPTPVAQLPKFTEAEKQLLKGSADFLGLSHYTSRLISKAQGDTCVPSYDTIGGFSQHVDPAWPQTESPWIRVVPWGIRRLLQFVSLEYTRGKVPIYLAGNGMPIGESEDLINDSLRIDYFNQYINEVLKAVKEDSVDVQSYIARSLIDGFEGPSGYSQRFGLYHVNFNDSSRPRTPRKSAYFFTSIIEKNGFLTKVVKRLPPASKANVPRKIRAFTFPSEVPSKAKVVWEKFSNQPKFERDLFYHGTFRDDFLWGVSSSAYQIEGAWDADGKGPSIWDNFTHTPGSNVKDSATGDIACDSYNHLDADLNMLRALKVKAYRFSISWSRIFPTGRNTSVNTRGVDYYNRLIDGLVASSISPMVTLFHWDLPQALQDIGGWENPSLIELFNSYADFCFQTFGDRVKFWMTFNDPTYQAWLGYGSGEFPPNVNDPGWGPYRIGHAIIKAHARVYHTYDEKYRQEQKGVISLSLGAHWAEPQSPGVPRDVEAADRMLQFSLGWFAHPIFRNGDYPDAMKWKVGNRSELQHLATSRLPSFTEEEKRYISATADVFCLNTYSSRIVRHATPRLNPPSYEDDRELTEREDSSWPSTAMNRAASWGMRRLLNWIKEEYGGVPIYITENGAGLKDPKVEDTNRIFYHKTYINEALKAYRLDGVDLRGYAAWSLMDSFEWLNGYTVKFGLYHVNFNNVNRPRTARASARYYTETMSCHLEIEGAWRADGKGLSIWDTFSHTPLRVGNDDTGDVACDSYHKIAEDVVALQNLGVTHYRFSISWTRLLPDGTTKYINEAGLNYYMRLIDTLQAASIQPQVTIYHWDLPQALQDVGGWENETVVQRFKEYADVLFQRLGDKVKFWITLNEPYVIANLGYGYGTAAPGSSQQDPPKGSQPHLSSPGPMLKSVHIPQATVGENIALPTFMGGWFAHPIFKNGDYPEVMKTRVRDRSLAAGLNKSRLPEFTESEKRRINGTYDFFGFNHYTTVLAYDINYASWISSFDADRGVASVTDRSWPDSGSFWLKMTPFGFRRILNWLKEEYNNPPIYVTENGVSQREESDLNDTARIYYLRSYINEALKAVQDKVDLRGYTVWTLMDNFEWATGFAEKFGVHFVNYTDTSLPRIPKASAKFYASIVRCNGFPDPAAGPHPCLQQDAEPTTSPMREEDVQFLGLRLGTAEAQTALYVLFALMLLGVCGVAFLSYKYCKRSKQKQTQPGEQELSYSSSF*