Part of scaffold_547 (Scaffold)

For more information consult the page for scaffold_547 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

R3HDM1 ENSTTRG00000003935 (Bottlenosed dolphin)

Gene Details

R3H domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003705, Bottlenosed dolphin)

Protein Percentage 75.88%
cDNA percentage 78.63%
Ka/Ks Ratio 0.58695 (Ka = 0.1331, Ks = 0.2268)

R3HDM1 ENSBTAG00000013302 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017695, Cow)

Protein Percentage 78.02%
cDNA percentage 81.56%
Ka/Ks Ratio 0.44444 (Ka = 0.1718, Ks = 0.3865)

R3HDM1  (Minke Whale)

Gene Details

R3H domain containing 1

External Links

Gene match (Identifier: BACU014937, Minke Whale)

Protein Percentage 83.33%
cDNA percentage 86.54%
Ka/Ks Ratio 0.78205 (Ka = 0.1412, Ks = 0.1806)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2487 bp    Location:718629..674923   Strand:-
>bmy_10552
ATGAAGTACAGTGCTGAAAAGGCTCAGAAGAGAGGTGGTTGTACTCTGACTCAATGGGCATTTGAAACATTCTCCTTACGGCCACTGCAGTCATTTGGACAGACAGGAAAAAGGTCTAAGTCAAGCTCAAAGTTAAAGCTAGTTCGGAGCCTTGCAGTGTGTGAAGAATCTCCACCACCCCCTACAGCAGAGATATCACAGGAGAACCAGGAGAAAATTCAGATCCAGTTAACACAATCATTTGAAAAAGAGGAGAAGCCCTCAAAAGATGAAGCAGAAAAAGAAAAAGCCAGTGATAAGTTGCCCAGAAAAATGTTATCAAGAGATTCCAGTCAAGAATACACTGATTCAACTGGCATAGATCTACATGAATTTTTAGTAAATACATTAAAAAACAATCCCAGGGACAGAATGATGCTGTTGAAATTGGAACAAGAAATTTTAGATTTCATTGGTAATAATGAGTCTCCACGTAAAAAATTCCCCCCAATGACATCTTACCATAGGATGCTATTACACAGAGTCGCTGCTTACTTTGGATTAGACCACAATGTTGATCAGAGTGGGAAGTCTGTCATAGTAAACAAAACTAGCAATACAAGAATACCTGATCAGAAATTTAATGAACATATTAAGGATGATAAAGGTGAAGACTTTCAGAAACGATATATCCTCAAGAGAGATAACTCTAGCTTTGACAAAGATGATAACCAGATGAGAATACGTTTGAAAGATGACAGAAGAAGCAAATCTATAGAAGAAAGAGAAGAAGAGTACCAGAGAGCTAGAGACCGAATATTTTCCCAAGATTCCCTGTGTTCCCAAGAGAATTATATTATTGACAAAAGAATCCAAGACGAGGATGCTAGTAGCACCCAGCAGAGGCGCCAGATATTTAGAGTTAATAAAGATTCTTCAGGGAGATCAACAAATAGCCATCAAAGCAGCACTGAGAACGAGTTGAAGTACTCTGAACCACGACCCTGGAGCAGCACAGATTCAGACAGCTCTCTCCGAAACTTCAAGCCTGCTGTAACCAAAGCCAGCAGCTTCAGTGGAATTTCAGTTCTGACAAGAGGTGATAGTTCTGGAAGCAGCAAAAGCATAGGCAGGCTTTCAAAAACAGGTTCTGAGTCTTCTGGTAGTGTAGGGTCATCTACGGGCTCTCTCTCTCACATCCAGCAGCCTCTTCCAGGTACAGCTCTCAGCCAGTCTTCTCATGGCGCACCTGTCGTCTATCCAACTGTCAGCACTCATAGTTCTCTTTCCTTTGATGGTGGCCTAAATGGGCAAGTCGCATCTCCTAGCACTAGCTTCTTTTTGCTTCCCTTGGAAGCGACAGGCATACCACCTGGCAGTATTCTGATCAACCCACAAACAGGTCAGCCCTTCCTAAACCCAGATGGGAGTCCAGTTGTGTGTAGCCCTCCTGTGACTCAACAGCCAGTTAGAGCCCAAGTGCCTGGACCTCCACAGCCGCCTCTGCCAGCACTGCCACCTCAACAGCAAGCAGCCCATCACATCTTCTCACAGCAGGACAACCTTGGGTCTCAGTTTAGCCACATGAGTCTTGCCCGCCAGCCATCTGCAGATGGCTCTGACCCTCACGCCACCATGTTCCAGTCCACTGTTGTTCTTCAGTCCCCACAGCAGTCTGGTTATATCATGACAGCAGTCCCTCCACCACCACCGCCGCCTCCTCCTCCTCCTCCTCCCCTACCACCTGGGCAGCCAGTCGCTACTGCTGCCTATTCTGCCTCTGGTCATCCTGTCAGCCAGCCTGTGCTCCAGCAGCAAGGATATATTCAACAGCCCTCTCCACAGATGCCAGCCTGTTATTGTGCTCCAGGCCACTACCACTCCAGTCAACCTCAGTATCGCCCCGTCCCTTCTGTCCATTACAGTTCACATCTAAACCAACCACTGCCACAGCCTGCACAGCAGGCAGGTGAGTATGTGAGGTGTTCAAGGAGAATTTTTATTGGTTTCTTTGAAGCCTTTTTAGCTGCTTGTCGCTGTTGGAAGGTAGGACCAGTGTGCTCATGCAAATGCCTCTCTGCCAAATATATTCCTCTCTGCCAAAAATGGACAACTGTAAATGCCACACCTCCTAATTCAGGGCCAAAATATCTACACGACAGATGGCATGTGTTTATCATCAGTGATGTTTCAGTTGTGGGGTTTTTCCTAATGCTGGTTATGAAAAGTAAAATGCACTGGGAAATGGACACAGGAACTTTTTGTTCTGATTTTCTGTACAGATTTATAGCAATTTCTTTCTCAAAATTTCGCTCTAAATTAACAAACCCAATTGAATCAAATATTCTTAGATCAGGAAGGAGGTTGGGGAAATACCTCAAGGATAAAATGCCTTTGGTCTTCCATGCAAGCACAGAAGTAGGAGAGCAGAGGGTGATAGAGGAGAAGAATAGCAAAGATGTGCTGGCAGCTGTGTTCTTCCAAATTCACCTGACAGACTATCCTTAG

Related Sequences

bmy_10552T0 Protein

Length: 829 aa      View alignments
>bmy_10552T0
MKYSAEKAQKRGGCTLTQWAFETFSLRPLQSFGQTGKRSKSSSKLKLVRSLAVCEESPPPPTAEISQENQEKIQIQLTQSFEKEEKPSKDEAEKEKASDKLPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPMTSYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKFNEHIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIFSQDSLCSQENYIIDKRIQDEDASSTQQRRQIFRVNKDSSGRSTNSHQSSTENELKYSEPRPWSSTDSDSSLRNFKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEATGIPPGSILINPQTGQPFLNPDGSPVVCSPPVTQQPVRAQVPGPPQPPLPALPPQQQAAHHIFSQQDNLGSQFSHMSLARQPSADGSDPHATMFQSTVVLQSPQQSGYIMTAVPPPPPPPPPPPPPLPPGQPVATAAYSASGHPVSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYSSHLNQPLPQPAQQAGEYVRCSRRIFIGFFEAFLAACRCWKVGPVCSCKCLSAKYIPLCQKWTTVNATPPNSGPKYLHDRWHVFIISDVSVVGFFLMLVMKSKMHWEMDTGTFCSDFLYRFIAISFSKFRSKLTNPIESNILRSGRRLGKYLKDKMPLVFHASTEVGEQRVIEEKNSKDVLAAVFFQIHLTDYP*