Part of scaffold_555 (Scaffold)

For more information consult the page for scaffold_555 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HPS1 ENSBTAG00000014314 (Cow)

Gene Details

Hermansky-Pudlak syndrome 1 protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019034, Cow)

Protein Percentage 75.63%
cDNA percentage 80.21%
Ka/Ks Ratio 0.24805 (Ka = 0.1662, Ks = 0.6699)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2328 bp    Location:915851..939500   Strand:+
>bmy_10558
ATGTGGCCACCGCCCGGCAGGAGTCAAAGCGCAGGAGTCAGTGCTCGCTGGGCCCGGCCGCCGAGCAGAAGCAAACCGAACGACAGGCAGAGGCTTAAGCCAGGCAGGGGCGGGGCGGGCTTCCAGTCCCTCCCCGGGCTGTCACGTGGGCGGTCAGGTGGCCACACCCGGAAGCACGCCCGCGGGATCCTGGCAGGCTGGGCGGTGTCTGGCTACTACGCGATGAAGTGCGTCTTGGTGGCCACAGAGGGCGCGGACGTCCTCTTCTACTGGACGGACGAGGAGTTTCAAGAGAGTCTGCGGCTGAAGTTTGGGCAGTCAGAGAATGAGGGAGAAGGGCTTCCCGCCCTGGAAGACCAGCTCAGCACCCTCCTGGCCCCAGTCATTATCTCCTCTATGACGATGCTGGAGAAGCTCTCAGACACATACACCTGCTTCTCGACGGAAAATGACAACTACCTGTACGTCCTTCACCTGTTCGGAGAATGCCTGTTCATCGCCATCAATGGAGACCACACAGAGGGCGAGGGGGACCTGCGGCAGAAGCTGTGCGTGCTCAAGTACCTTTTCGAGGTGCACTTCGGGCTGGTCACCATGGACGGCCAGCTCATCCGAAAGGAGCTGCGGCCCCCAGACCTGGAGCAGCGTGTGCAGGTGTGGGAGCACTTCCAGAGCCTGCTGTGGACCTACGGCCGCCTGCGGGAGCAGGAGCAGTGTTTCGCTGTGGAGCTATGTGAGCTGTGCATCGAGGTGCTGGAGCGGCACGTCGTCCAGGCCATCAACTCCAGCCCTGGGCGGGCCRGCGAGGAGGCCCTACACGCCTTCCTGCTCGTGCATTCCAAGCTGCTGGCTTTCTACTCCAGCCACAGCGCCGGCTCCCTGCGCCCAGCCGACCTCCTCGCCCTCATCCTTCTGGTGCAGGACCTCTACCCCAGCGAGAGCACGGCGGAGGACAACGACACCCAGGTCTCGGGGCAGCTCTCTGGGCAGCAGGAGGCCTTCAGGAAGGCGACTCAGAAAACCAGTCTGGAGAGTGCTGGGCAGGCTGCTGGGGAGACTGTGGTTTCCAAGTCACAGCCCTGGGCGTGTGGTAGCACAGTCTGGCTGGATGGGGGTACCCCTCCCACTGATGCTCCCCACGTCCAGATGGCTGAGGACACCCTCCACACGCTGGTCCCTCGCTCCCCAAGGCCCTCCAGCCCCAGAAGGATTTTCCTGGATGCCACCGTGAAAGAGAGCTACTGCCCCATGGTGCCCCACACCATGTACTGCCTGCCCCTGTGGCCAGGCATCAACATGGTGCTCCTGACCAAGAGCCCCAGTACGGCCCTGGCCCTGGCCCTGTACCAGCTGCTGGATGGGTTTTCTCTACTGGAGAAGAAGCTGAAGGAGGGGCAGGAGGCCGGGAGTGCCCTGCGGTCCCACCCCCTCATGGGGGACCTACGCCAGAGGATGGACAAGTTTGTCAAGAATCGAGGTGGGCAAGAGCTTCAGGCTGCTCCAGGCATGCGGGAGGGTGAAGAGGCAGCTTTGCGCCATCTACCGGCTCAGCTTCCTGACCACGGCTCCGGGCCGGGGAGGCCCCTACCTGCCCCAGCACCTGCAGGACCAGGTCCAGACGCTCATGCAGTAAGTGTGGGTGTGGCCCCTCGGTGGCCAGGGCAGGAGCTGGGGTGCACCTGGCCCCAGCCCTGTTCCCCCTGCTTCCTCGGCAGAGAAAAGCTGGCAGACTGGAAGGACTTCCTGTTGGTGAAGAGCCGGAGGAATGTCACCATGGTGTCATATCCTGACTTCCCGGGCCTGGTGCATTTTATCTACGTGGACCGCACCACCGGCCAGATGGTGGCCCCTTCCCTCAGCAGCACTGAAAGGATGTCATCGGAGCTGGGCAGGGGGCCCCTGGCCACCTTCGTCAGAACCAAGGTCTGGTCTCTGATCCAGCTGGCGCGCAGATACCTGCAGAAGGGCTACACCACGCTGCTGTCCCGCGAGGGGGACTTCTACTGCTCCTACTTCCTGTGGTTCGAGAACGAGATGGTGGGTGTGGCCAGCCCGGGGCAGGGCAGTCCTGAAATGCTTTCTTTCCCTGTGACTCTTGGATCCCTTTCTTCTGGATTCTGTTCACTCTTCTTGTCCCTGCTGGAGCTGACAGCTAAGCCCAGCTGGAAGCTCCTGCGCTACTACAGCAAGAGCCACCCGGCTGAGGCTGTCAGGTGCCATGAGCTGCTGACCCTCCACCTGTCGGTCATCCCCACGGACGTGCTGGTGCAGCAGGCCGGCGAGCTGGCCCGGCGCCTGGGCGAGGCCTCCCGTGTCCCCCTGCTCTAG

Related Sequences

bmy_10558T0 Protein

Length: 776 aa     
>bmy_10558T0
MWPPPGRSQSAGVSARWARPPSRSKPNDRQRLKPGRGGAGFQSLPGLSRGRSGGHTRKHARGILAGWAVSGYYAMKCVLVATEGADVLFYWTDEEFQESLRLKFGQSENEGEGLPALEDQLSTLLAPVIISSMTMLEKLSDTYTCFSTENDNYLYVLHLFGECLFIAINGDHTEGEGDLRQKLCVLKYLFEVHFGLVTMDGQLIRKELRPPDLEQRVQVWEHFQSLLWTYGRLREQEQCFAVELCELCIEVLERHVVQAINSSPGRAXEEALHAFLLVHSKLLAFYSSHSAGSLRPADLLALILLVQDLYPSESTAEDNDTQVSGQLSGQQEAFRKATQKTSLESAGQAAGETVVSKSQPWACGSTVWLDGGTPPTDAPHVQMAEDTLHTLVPRSPRPSSPRRIFLDATVKESYCPMVPHTMYCLPLWPGINMVLLTKSPSTALALALYQLLDGFSLLEKKLKEGQEAGSALRSHPLMGDLRQRMDKFVKNRGGQELQAAPGMREGEEAALRHLPAQLPDHGSGPGRPLPAPAPAGPGPDAHAVSVGVAPRWPGQELGCTWPQPCSPCFLGREKLADWKDFLLVKSRRNVTMVSYPDFPGLVHFIYVDRTTGQMVAPSLSSTERMSSELGRGPLATFVRTKVWSLIQLARRYLQKGYTTLLSREGDFYCSYFLWFENEMVGVASPGQGSPEMLSFPVTLGSLSSGFCSLFLSLLELTAKPSWKLLRYYSKSHPAEAVRCHELLTLHLSVIPTDVLVQQAGELARRLGEASRVPLL*