Sequence detailsbmy_10577 (Coding sequence)

Part of scaffold_556 (SequenceType object (1))

For more information consult the page for scaffold_556 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HLXENSBTAG00000014560 (Cow)

Gene Details

H2.0-like homeobox protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019352, Cow)

Protein Percentage 94.62%
cDNA percentage 93.03%
Ka/Ks Ratio 0.10019 (Ka = 0.0271, Ks = 0.2702)

HLX (Minke Whale)

Gene Details

H2.0-like homeobox

External Links

Gene match (Identifier: BACU004027, Minke Whale)

Protein Percentage 79.22%
cDNA percentage 80.93%
Ka/Ks Ratio 0.45604 (Ka = 0.0449, Ks = 0.0986)

Additional orthologs identified in other species via the OPTIC pipeline.

HLX (Human)   Hlx (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1461 bp    Location:694879..690138   Strand:-
Raw sequence 
>bmy_10577
ATGTTCGCCGCCGGGCTGGCTCCCTTCTACGCGTCCAACTTCAGCCTCTGGTCGGCCGCCTACTGTTCCTCCGCCGTCCCGGGCGGCTGCTCCTTCCCCCTGGACCCCGCCGCCGTCAAGAAACCCTCCTTCTGCATCGCGGACATCCTGCACGCCGGCGTTGGGGAGACGGGGGCGGCTCCGGAGGGTCTGGCGGGGGCCTCGGCCGCTGCCCTCACCGCGCACTTGGGATCGGCTCACCCGCACGCCTCTTTTCAAGCTGCCGCCAGATCCCCGCTTCGACCCACCCCGGTGGTGGCGCCCTCCGAAGTCCCGGCTGGCTTCCCTCCGCGGCTGTCCCCGCTCTCAGCCGCCTACCACCACCATCACCCACAACAGCCACCGCAGCAGCAGCAACCGCAGCAGCAACAGCCTCCGCCTCCACCCCGGGCTGGAGGCTTGCAGCCCCCGGCCTCCGGGTCGCGGCTGGTCCCGAATCCCCACCATAGCGCTTCCGCCCCGGCCCCCTCCAGCAAGGACCTCAAATTTGGAATTGACCGCATTTTGTCTGCAGAATTTGACCCAAAAGTCAAGGAAGGCAACACACTGAGAGATCTCACGTCGCTGCTAACCGGCGGGCGGCCCGCGGGGATGCACCTCCCCGCTCTGCAGCCCTCCACCGGCCAGTTCTTCGCGTCTCTAGATCCCATTAACGAGGCTTCTGCCATCCTGAGTCCCTTAAGCTCAAACCCGAGAAATTCAGTTCAGCATCAGTTTCAAGACACCTTTCCAGGTCCCTACGCTGTGCTCACGAAGGACACCATGCCGCAGACGTACAAGAGAAAGCGCTCGTGGTCGCGGGCGGTCTTCTCCAACCTGCAGAGGAAAGGTCTGGAGAAAAGGTTTGAGATTCAGAAGTACGTGACCAAGCCAGACCGAAAGCAGCTGGCCGCGATGCTGGGTCTCACCGACGCCCAGGTGAAGGTGTGGTTCCAGAACCGGCGGATGAAGTGGCGACACTCCAAGGAGGCCCAGGCCCAGAAGGACAAAGACAAGGAGGCTGGCGAGAAACCGTCGGGCGGAGCCCCGGCTGGCGACGGCGAGCAGGAGGAGCGGAGCCCCAGCCGCTCGGAGGGCGAGGCTGAGAGCGAGAGTAGCGACTCCGAGTCTCTGGACATGGCCCCCAGCGACACGGAGCGGACTGAAGGGGCCGAGCGGTCTCTGCACCAAACGACGGTCATCAAGGCCTCGGCCGCCGGCGCCCTCCTCGCCGCCAGCAGCGGAGGCAGTGCGGGGAGCGGCGGCGGCGGTTTTAACTTCGGCGTCCTCAGTAGCGGCAGCACCGGCGGCGCCGGGAGCTCCGGCGGCCAGGGCAGCTGCAGCGGCGGCGGCGCCTCGGAGCTGCTCCCTGCGCCCCAGCCAGCCCTTGGCAGCGCCCCCAAAAGCCCCGAGCCCGCCCCGGCGCCGCTCGGCGGCCTCTAG

Related Sequences

bmy_10577T0 SequenceType object (3)

Length: 487 aa      View alignments
>bmy_10577T0
MFAAGLAPFYASNFSLWSAAYCSSAVPGGCSFPLDPAAVKKPSFCIADILHAGVGETGAAPEGLAGASAAALTAHLGSAHPHASFQAAARSPLRPTPVVAPSEVPAGFPPRLSPLSAAYHHHHPQQPPQQQQPQQQQPPPPPRAGGLQPPASGSRLVPNPHHSASAPAPSSKDLKFGIDRILSAEFDPKVKEGNTLRDLTSLLTGGRPAGMHLPALQPSTGQFFASLDPINEASAILSPLSSNPRNSVQHQFQDTFPGPYAVLTKDTMPQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKDKEAGEKPSGGAPAGDGEQEERSPSRSEGEAESESSDSESLDMAPSDTERTEGAERSLHQTTVIKASAAGALLAASSGGSAGSGGGGFNFGVLSSGSTGGAGSSGGQGSCSGGGASELLPAPQPALGSAPKSPEPAPAPLGGL*