Sequence details bmy_10588 (Coding sequence)

Part of scaffold_551 (Scaffold)

For more information consult the page for scaffold_551 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RINT1 ENSTTRG00000001478 (Bottlenosed dolphin)

Gene Details

RAD50 interactor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001395, Bottlenosed dolphin)

Protein Percentage 87.54%
cDNA percentage 88.31%
Ka/Ks Ratio 0.40813 (Ka = 0.029, Ks = 0.0712)

RINT1 ENSBTAG00000008302 (Cow)

Gene Details

RAD50-interacting protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000048133, Cow)

Protein Percentage 93.48%
cDNA percentage 93.53%
Ka/Ks Ratio 0.20892 (Ka = 0.036, Ks = 0.1721)

Additional orthologs identified in other species via the OPTIC pipeline.

RINT1 (Human)   Rint1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2232 bp    Location:514874..487479   Strand:-
Raw sequence 
>bmy_10588
CTGGGAGGAGAGGAAGAAACCAGAGAGACGGCAGAGGAAGTTGCTGTGGCTCTGGGAGCTACGGTCTCGAAACTCTACGGGTGTCTGATCGCTGGCCGGAGCCAGAGTCCATTGGCCACGCTGGCTGCGCAAGGAGCCGAGGACTCGCACGGAGGCAGGATGCTCCTGGCCGGCGATTTCGGCAAGGCGCCGGCAACCCGGTACTGCTCTGAAAATGGTGACCAAAGGAAGAACATCAACGAGAAAAGTGACATAAATATTGCAGCTCTCGTTGGAAACGAACCAGTCTGTGAAGGTACAGATAACGGTGATCTCCCTTCCTATGTGGCGGAATTTATAGAAAAGGAAGTCGGAAATGACCTTAAATCTTTAAAGAAACTTGATAAACTCATAGAACAGATGACAGAAAAACAAACATGCATTTTGAAGGTACTTACAGTTTCATCAGAAATCCCTAAAAGAATTCAGAGTGCCTTAAAAAATGCAGAAGAATCAAAGCAATTCCTTAATCACTTTCTGGAGCAAGAAAGCCATCTCTTCAGTTCCATTAACAGCCATCTGCTGACCGCTCAGCCCTGGATAGAAGATCTTGGAGCCATGATTAACCAAATTGAAGAGATTGAACGGCATCTTGCTTATCTTAAATGGATTTCACAAATTGAAGAACTCAGTGATAACATTCAGCAATATCTGATGACCAATAATGTSCTAGAGGCAGCTTCTACTCTGGTCTCTATGGCAGAACTTGACATCAGGCTTCAGGAATCATCCTGTACTCATCTTCTTGGTTTCATGAGAGCCACTGTTAAATTCTGGCATAAAATTCTCAAGGACAAGCTTACAAGGCAAGAAATTTATCCATATTTCATGCCTGAATGGTACTTGGCTCAGGTACTTATGTGGATTGGGAACCACACTCAGTTTCTGGATGAGAAGATTCAGCCAATATTAGACAAAGTAGGCTCTTCGGTAAATGCAAGGCTTGAATTTTCTCGGGGCCTTATGATGCTGGTTCTTGAAAAGTTAGCTGCTGATATTCCTTGTCTGCTCTATGATGACAGTCTCTTCTGTCATTTGGTGGATGAGGTGCTTTTGTTTGAAAGAGAACTACACAGCGTTCATGGCTATCCCAGCACTTTTGCTAATTGTATGCATATTCTGTCAGAAGAGACCTGTTTTCAGAGATGGTTGACTGTGGAGAGAAAATTTGCTCTTCAAAAAATGGACTCAATGCTCTCGTCAGAAGCTGCCTGGATATCCCAATATAAGGATATCACTGATGTGGATGAGATGAAAGTTCCAGACTGTGCAGAAACGTTTATGACACTACTCTTGGTTATAACTGACAGATATAAAAATCTTCCCGCAGCTTCCAGAAAGCTGCAGTTCCTGGAGTTACAGAAGGACTTAGTAGATGATTTTAGGATACGATTAACTCAGGTGATGAAAGAAGAGACTAGAGCTTCCCTTGGCTTTCGATACTGTGCAATTCTTAATGCCGTGAACTATATCTCAACAGTACTAGCAGATTGGGCTGACAATGTTGCAGCATTGGAAGTCTTTGCAGAGAATAACACTCTCAGTAAATTGCAGCTGGGACAACTGGCCTCTATGGAGAGCTCTGTCTTTGATGACATGATTAACCTGTTAGAGCGTTTAAAGCATGACATGCTGACCCGGCAAGTAGACCATGTTTTTAGAGAAGTTAAAGATGCTGCAAAATTGTATAAAAAAGAAAGGTGGTTGTCCTTGCCATCGCAGTCAGAGCAGGCAGTGATGTCCCTGTCCAGTTCGGCTTGCCCCTTACTGCTTACTTTACGAGACCGTTTACTTCAGTTGGAGCAGCAGCTCTGCTTCTCCTTATTTAAAATCTTCTGGCAAATGCTTGTGGAGAAGCTGGACATATACATCTACCAAGAAATAATTCTTGCCAATCACTTCAATGAAGGAGGAGCGGCTCAGCTGCACTTCGATATGACTCGGAATCTTTTCCCTTTGTTTTCCCACTATTGCAAGAGGCCAGAAAATTATTTTAAACATGTAAAAGAAGCCTGTATTGTTTTGAATTTGAACACTGGTTCTGCCCTACTTCTGAGAGATGTCCTGCAGTCAACTTCAGGGCAACCTCCTGCCACAGCGGCATTAAATGAAGTCGGAATTTATAAACTGGCTCAGCAAGATGTTGAGATTCTACTTAATTTGAGGACAAACTGGCCTAACACTGGAAAATAA

Related Sequences

bmy_10588T0 Protein

Length: 744 aa      View alignments
>bmy_10588T0
LGGEEETRETAEEVAVALGATVSKLYGCLIAGRSQSPLATLAAQGAEDSHGGRMLLAGDFGKAPATRYCSENGDQRKNINEKSDINIAALVGNEPVCEGTDNGDLPSYVAEFIEKEVGNDLKSLKKLDKLIEQMTEKQTCILKVLTVSSEIPKRIQSALKNAEESKQFLNHFLEQESHLFSSINSHLLTAQPWIEDLGAMINQIEEIERHLAYLKWISQIEELSDNIQQYLMTNNVLEAASTLVSMAELDIRLQESSCTHLLGFMRATVKFWHKILKDKLTRQEIYPYFMPEWYLAQVLMWIGNHTQFLDEKIQPILDKVGSSVNARLEFSRGLMMLVLEKLAADIPCLLYDDSLFCHLVDEVLLFERELHSVHGYPSTFANCMHILSEETCFQRWLTVERKFALQKMDSMLSSEAAWISQYKDITDVDEMKVPDCAETFMTLLLVITDRYKNLPAASRKLQFLELQKDLVDDFRIRLTQVMKEETRASLGFRYCAILNAVNYISTVLADWADNVAALEVFAENNTLSKLQLGQLASMESSVFDDMINLLERLKHDMLTRQVDHVFREVKDAAKLYKKERWLSLPSQSEQAVMSLSSSACPLLLTLRDRLLQLEQQLCFSLFKIFWQMLVEKLDIYIYQEIILANHFNEGGAAQLHFDMTRNLFPLFSHYCKRPENYFKHVKEACIVLNLNTGSALLLRDVLQSTSGQPPATAALNEVGIYKLAQQDVEILLNLRTNWPNTGK*