Part of scaffold_565 (Scaffold)

For more information consult the page for scaffold_565 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VTCN1 ENSTTRG00000015146 (Bottlenosed dolphin)

Gene Details

V-set domain containing T cell activation inhibitor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014360, Bottlenosed dolphin)

Protein Percentage 54.9%
cDNA percentage 57.93%
Ka/Ks Ratio 0.57556 (Ka = 0.1605, Ks = 0.2789)

VTCN1 ENSBTAG00000014466 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019233, Cow)

Protein Percentage 88.76%
cDNA percentage 90.64%
Ka/Ks Ratio 0.41016 (Ka = 0.0743, Ks = 0.1812)

VTCN1  (Minke Whale)

Gene Details

V-set domain containing T cell activation inhibitor 1

External Links

Gene match (Identifier: BACU002671, Minke Whale)

Protein Percentage 95.89%
cDNA percentage 98.02%
Ka/Ks Ratio 0.96532 (Ka = 0.0203, Ks = 0.021)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 960 bp    Location:8597..32175   Strand:+
>bmy_10606
GCTCTGGAGGTTGAGTGGTTTCCCAAGGGAATACCAGCTCAGAACAAACCTCAAGGTGATTTCTGCTTAGATAGGGAACTTGCTGACAGACGGCAGGGTTCTGCTTCACAGCGAGCGAAGCATGTGGGCCTGGGGGAGAGAGCTTATGTTGAAGAAAAAGTTGAGACTCTTTATGTAACACCTCTTACAAATGACAGCATTATTAGCATCATCATTATTCTGGCTGGAGCAATTGCACTTATCATCGGTTTTGGTATTTCAGGGAGACACTCCATCACAGTCACTACTCTCACCTCAGCTGGGAACATTGGGGAGGATGGAATCCTGAGCTGCACTTTTGAACCTGACATCAAACTTTCTGATATCGTGATACAGTGGCTGAAGGAAGGTGTTATGAGCTTGGTCCATGAGTTCAAAGAAGGCAAAGATGACCTGTCGGACCAGGATGAAATGTTCAGAGGTTGGACAGCAGTGTTTGCTGATCAAGTAATAGTTGGCAGTGCCTCTCTGAGGCTGAAAAATATGCAACTCACAGATGCTGGCACCTATAAATGTTACATCATCACTTCTAAAGGCAAGGGGAATGCTAACCTAGAGTATAAAACTGGAGCCTTCAGCATCCCAGAAGTGAACGTGGACTGTAACGCCACCTCAGAGAGCTTACGATTTGACCAGGGAGCCAACTTCTCAGAAGTCTCCGATACCAGCTTTGAGCTGAACTCTGAGAATGTGACCATGAAGGTTGTATCTGTACTCTACAATGTCACAATCAACAACACATACTCCTGTATGATTGAAAACAACATTGCCAAAGCCACAGGGGATATCAAAGTGACAGACTCTGAGATTAAAAGGCGAAGTCACCTCCAGCTGCTGAACTCAAAGGCTTCCCTGTGTGTCTCTTCTGTTGCCATCAGCTGGGTACTCCTGCCTCTCTGCCCTTACCTGATGCTAAAATAA

Related Sequences

bmy_10606T0 Protein

Length: 320 aa      View alignments
>bmy_10606T0
ALEVEWFPKGIPAQNKPQGDFCLDRELADRRQGSASQRAKHVGLGERAYVEEKVETLYVTPLTNDSIISIIIILAGAIALIIGFGISGRHSITVTTLTSAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVMSLVHEFKEGKDDLSDQDEMFRGWTAVFADQVIVGSASLRLKNMQLTDAGTYKCYIITSKGKGNANLEYKTGAFSIPEVNVDCNATSESLRFDQGANFSEVSDTSFELNSENVTMKVVSVLYNVTINNTYSCMIENNIAKATGDIKVTDSEIKRRSHLQLLNSKASLCVSSVAISWVLLPLCPYLMLK*