Part of scaffold_565 (Scaffold)

For more information consult the page for scaffold_565 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM45 ENSTTRG00000015131 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 45

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014348, Bottlenosed dolphin)

Protein Percentage 76.57%
cDNA percentage 82.54%
Ka/Ks Ratio 0.55527 (Ka = 0.1753, Ks = 0.3158)

TRIM45 ENSBTAG00000001748 (Cow)

Gene Details

Tripartite motif-containing protein 45

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002293, Cow)

Protein Percentage 74.29%
cDNA percentage 80.19%
Ka/Ks Ratio 0.39774 (Ka = 0.1834, Ks = 0.4612)

TRIM45  (Minke Whale)

Gene Details

tripartite motif containing 45

External Links

Gene match (Identifier: BACU020295, Minke Whale)

Protein Percentage 80.19%
cDNA percentage 85.14%
Ka/Ks Ratio 0.58544 (Ka = 0.1475, Ks = 0.252)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1578 bp    Location:69216..78287   Strand:+
>bmy_10607
ATGGCAGAAAAGAGGAAGCCGCTGCTGGGCTTCGTGGGCAAACTCCCCAGTGGGACCACACCTGGAAACTCAGGCAAGACTCGCTGCCCTTTGTGCATGGGGCTTTTCAAAGCCCCCAGGCTCTTGCCTTGTTTGCACACAGTTTGCACCACCTGTCTGGAGCAGCTGGAACCCTTCTCARTAGTGGACATCCGAGGGGGAGACTCTGACACAAGCTCTGAGGGGTCAGTATTCCAGGAACTCAAGCCACGCACTCTGCAGCCRCAGATTGGCATCCTCTGTCCGGTATGTGATGCTCAGGTGGACCTGCCCATGGGTGGAGTGAAGGCTTTAACCATAGACCACCTGGCCATGAATGATGTGATGCTGGAGAGTCTGCGTGGGGAAGGCCAGGGCCTGGTGTGTGACCTGTGCAGCGACAGGGAAGTGGAGAAGAGGTGTCAGACCTGCAAAGCCAATCTCTGCCACTTCTGCTGCCAGGCTCATAGGCGGCAGAAGAAGAYGACTTACCATACCATGGTGGACCTGAAAGACCTGAAAGGCTACAGCCAGACGGGGAAACCCATTCCGTGTCCTGCCCACCCTGCGGAGGAGCTGAGACGGTTCTGCGAGCTCTGCGACCAGCCCGTGTGCCGGGACTGCGTGGTGGGGGAGCACCGGGAGCACCCCTGCGAGCTCACCAGCAGCGCTGTCCACAAGCACGGGGACTCCGTGCGGGAGCTCCTCAAAGGCACCCAGCCCCACGTGGAGGCCCTGGAGAAGGCCCTGGCACAGATCAGAGGGACCAACGGCGCCCTGCAGGAACGGGTGGAGGCCGTGGCCGCCGACGTCCGCACCTTCTCCGAGGGCTACATCAGGGCCGTCGAGGAGCATCGGGACAAGCTGCTGAAGCAGCTGGAAGACATCCGGATCCAGAAGGAAACCTCCCTGCAGCTGCAGAAGGCACAGCTGGGGCAGCTGCTGGCAGACATGCGGACCGGAGTGGAGTTCACCGAGCGCTTGCTGACCAGTGGCTCCGACCTGGAGATCCTCATCACCAAAGGGGTGGTCATGGAACGGCTCACAGAGTTGAACAAAGTGGCATATAGTGCCCGTCCTGGAGTGAACGAGAAGATCACCTTCTCTCCTAAGGAGAAAGCAGGCCTGTGCCGTGGCTATGAAGTTTATGGGGCCATCAGTACCAAAGAGGTCGATCCAGCCAAATGTGTCCTTCAAGGGGAAGGTCTGAACACTGAAGGGCTCACCATTCACTGTGACCGTGAGGAAACGGCACCGCTCACACCCAGGCGTGTTTCACTGCTGCACGTTCTGCTCCAGCGGAGGCCAGAAGACTGCTCGCTGCGCGTGTGGAGGCACCATGCCGGGTGGGTACCTAGGCTGTGGCCATGGACACAAAGGCCACCCGGGGCGCCCCCACTGGTCGTGCTGTGGGAAGTTTACCGAAAAGTCGGAATGCACGTGGGCAGGTGGGCAGAGCGCAGCGAGGAGTCTACTGAGGACGGTGGCCCTCTGACGGCTTCCTGGGTCTGTGGTCACAGCTGCGGCCAGCACGGCTTCAGATCAACAGAGGACCCCTGA

Related Sequences

bmy_10607T0 Protein

Length: 526 aa      View alignments
>bmy_10607T0
MAEKRKPLLGFVGKLPSGTTPGNSGKTRCPLCMGLFKAPRLLPCLHTVCTTCLEQLEPFSXVDIRGGDSDTSSEGSVFQELKPRTLQPQIGILCPVCDAQVDLPMGGVKALTIDHLAMNDVMLESLRGEGQGLVCDLCSDREVEKRCQTCKANLCHFCCQAHRRQKKXTYHTMVDLKDLKGYSQTGKPIPCPAHPAEELRRFCELCDQPVCRDCVVGEHREHPCELTSSAVHKHGDSVRELLKGTQPHVEALEKALAQIRGTNGALQERVEAVAADVRTFSEGYIRAVEEHRDKLLKQLEDIRIQKETSLQLQKAQLGQLLADMRTGVEFTERLLTSGSDLEILITKGVVMERLTELNKVAYSARPGVNEKITFSPKEKAGLCRGYEVYGAISTKEVDPAKCVLQGEGLNTEGLTIHCDREETAPLTPRRVSLLHVLLQRRPEDCSLRVWRHHAGWVPRLWPWTQRPPGAPPLVVLWEVYRKVGMHVGRWAERSEESTEDGGPLTASWVCGHSCGQHGFRSTEDP*