Part of scaffold_565 (Scaffold)

For more information consult the page for scaffold_565 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CD58 ENSTTRG00000013417 (Bottlenosed dolphin)

Gene Details

CD58 molecule

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012730, Bottlenosed dolphin)

Protein Percentage 88.7%
cDNA percentage 94.14%
Ka/Ks Ratio 1.04427 (Ka = 0.0627, Ks = 0.06)

CD58 ENSBTAG00000040131 (Cow)

Gene Details

CD58 protein; Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023836, Cow)

Protein Percentage 66.53%
cDNA percentage 77.0%
Ka/Ks Ratio 0.66476 (Ka = 0.2535, Ks = 0.3814)

CD58  (Minke Whale)

Gene Details

CD58 molecule

External Links

Gene match (Identifier: BACU002675, Minke Whale)

Protein Percentage 86.57%
cDNA percentage 90.38%
Ka/Ks Ratio 0.95182 (Ka = 0.1034, Ks = 0.1086)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 732 bp    Location:571891..607118   Strand:+
>bmy_10615
ATGGCCGCGGGGAGCGCCCCGGGGTGGGCCGTGGGGGCCCTCGGAGTGGTCTGCCTGTTGCTCCGGTTGGATTTCATTAGCTGTGATTCCCAAGTAATATATGGAGCTGTGAACAAGAATGTAACTTTATACGCATCAAGTTTTAAACCCTTTAAGGAGATCGTGTGGAAAAGAGGAAAGGATAAAGTTGTAGAATGGGATGACCAATCTGAAGTCAGAGCTTTTCTATCTTTTAAAGATAGAGTTAAATTAGACATTGTGTCGGGTAACCTCACAATCTTCAAGTTAACACGATCAGACGAAGATGAGTACGGAATTGAATCCCCAAGTGTTAGAAATAACAGCAAGTTCACCCTCAAAGTGATCGAGTCTCTTCCATCACCAGCACTATCTTGCACATTGACTGACGGGAACATTACACTCCAGTGCATGATCCTGGAAGCTTACGACACCCATCTAGAACTCATACAGTACTCCTGGGACTGTCCTTCAACAATACAGTGTCAGAGTGGCTCAAAACCATCTGAAGCGTATGTTACGAAGGAAGGTGATCTTTCACAGGAAATTCAGTGTATCATTAGCAATCCATTATTCAGAAGGACAGCGTCAATCATTTTGTCAACCTGTGTCCCAAGTGACAATACAAGGCACAGGTTTGTGCTTTTAGTCATACTGCCAGTACTAATATGTGGTTTGCTGTTTATAAAATGTACGTATACTTTCTTTTTTTAA

Related Sequences

bmy_10615T0 Protein

Length: 244 aa      View alignments
>bmy_10615T0
MAAGSAPGWAVGALGVVCLLLRLDFISCDSQVIYGAVNKNVTLYASSFKPFKEIVWKRGKDKVVEWDDQSEVRAFLSFKDRVKLDIVSGNLTIFKLTRSDEDEYGIESPSVRNNSKFTLKVIESLPSPALSCTLTDGNITLQCMILEAYDTHLELIQYSWDCPSTIQCQSGSKPSEAYVTKEGDLSQEIQCIISNPLFRRTASIILSTCVPSDNTRHRFVLLVILPVLICGLLFIKCTYTFFF*