Part of scaffold_558 (Scaffold)

For more information consult the page for scaffold_558 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRPC1 ENSTTRG00000010035 (Bottlenosed dolphin)

Gene Details

transient receptor potential cation channel, subfamily C, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009517, Bottlenosed dolphin)

Protein Percentage 98.96%
cDNA percentage 98.47%
Ka/Ks Ratio 0.1463 (Ka = 0.0065, Ks = 0.0441)

TRPC1 ENSBTAG00000002232 (Cow)

Gene Details

short transient receptor potential channel 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002887, Cow)

Protein Percentage 98.54%
cDNA percentage 95.69%
Ka/Ks Ratio 0.04734 (Ka = 0.0083, Ks = 0.1756)

TRPC1  (Minke Whale)

Gene Details

transient receptor potential cation channel, subfamily C, member 1

External Links

Gene match (Identifier: BACU012770, Minke Whale)

Protein Percentage 89.38%
cDNA percentage 91.25%
Ka/Ks Ratio 0.52153 (Ka = 0.08, Ks = 0.1535)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1443 bp    Location:918508..948362   Strand:+
>bmy_10668
ATGTGTGTGCTTCGTTTTCAGTTTGTCTCCCAGTCCAACTGTCAGCAGTTCCTGAACACTGTTTGGTTTGGACAGATGTCAGGTTACCGACGTAAGCCTACCTGTAAGAAGATAATGACTGTTTTGACAGTTGGCATGTTTTGGCCAGTTTTGTCACTTTGTTATTTGATAGCTCCCAAATCTCAGTTTGGCAGAATTATTCACACACCTTTTATGAAATTTATTATTCATGGAGCATCATATTTTACATTCCTGCTATTACTAAACCTATACTCTCTTGTCTACAATGAGGATAAGAAAAACACAATGGGGCCAGCCCTTGAAAGAATAGACTATCTTCTTATACTGTGGATTATTGGGATGATTTGGTCAGACATTAAAAGACTCTGGTATGAAGGGTTGGAAGACTTTTTAGAAGAATCACGTAATCAACTCAGTTTTGTCATGAATTCACTTTATTTGGCAACCTTTGCCCTCAAAGTGGTTGCTCACAACAAGTTTCATGATTTTGCTGATCGAAAGGACTGGGATGCATTCCATCCTACACTGGTGGCAGAAGGGCTTTTTGCGTTTGCCAATGTTCTGAGTTATCTTCGTCTCTTTTTTATGTATACAACAAGCTCTATTTTGGGTCCATTACAGATTTCAATGGGACAGATGTTACAAGATTTTGGAAAATTTCTTGGAATGTTTCTTCTTGTTTTGTTTTCTTTCACAATTGGACTCACACAACTGTATGATAAAGACTATACTCCAAAAGAACAGAAGGACTGTGTAGGCATCTTCTGTGAACAGCAAAGCAATGATACCTTCCATTCGTTCATCGGCACTTGCTTTGCTTTGTTCTGGTATATTTTCTCCTTAGCACATGTGGCAATCTTTGTCACAAGATTTAGCTATGGAGAAGAATTACAGTCCTTCGTCGGAGCTGTTATTGTTGGGACATACAATGTTGTGGTTGTGATTGTGCTTACCAAGCTGCTGGTGGCAATGCTTCATAAAAGTTTTCAGTTGATAGCAAATCATGAAGACAAAGAATGGAAGTTTGCTCGAGCAAAGTTGTGGCTTAGCTACTTTGATGACAAATGTACATTACCCCCACCTTTCAACATCATTCCTTCACCAAAGACTATCTGCTATATGATTAGTAGCCTCAGTAAATGGATTTGCTCTCATACATCAAAAGGCAAGGTTAAACGGCAGAACAGCTTAAAGGAATGGAGAAATTTGAAGCAAAAGAGAGATGARAACTACCAAAAAGTGATGTGCTGTTTAGTGCATCGTTACTTGACTTCCATGAGACAAAAGATGCAAAGTACAGATCAGGCAACTGTGGAAAATCTAAATGAACTGCGCCAAGATCTGTCAAAATTCCGAAATGAAATAAGGGATTTACTTGGCTTTCGGACTTCTAAATATGCTATGTTTTATCCAAGAAATTAG

Related Sequences

bmy_10668T0 Protein

Length: 481 aa      View alignments
>bmy_10668T0
MCVLRFQFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGMFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKDYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN*