Part of scaffold_558 (Scaffold)

For more information consult the page for scaffold_558 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCOLCE2 ENSTTRG00000010037 (Bottlenosed dolphin)

Gene Details

procollagen C-endopeptidase enhancer 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009519, Bottlenosed dolphin)

Protein Percentage 88.04%
cDNA percentage 89.47%
Ka/Ks Ratio 0.41255 (Ka = 0.09, Ks = 0.2182)

PCOLCE2 ENSBTAG00000016026 (Cow)

Gene Details

procollagen C-endopeptidase enhancer 2 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021330, Cow)

Protein Percentage 87.12%
cDNA percentage 86.3%
Ka/Ks Ratio 0.22348 (Ka = 0.0914, Ks = 0.4091)

PCOLCE2  (Minke Whale)

Gene Details

procollagen C-endopeptidase enhancer 2

External Links

Gene match (Identifier: BACU012771, Minke Whale)

Protein Percentage 80.89%
cDNA percentage 83.73%
Ka/Ks Ratio 0.59053 (Ka = 0.1645, Ks = 0.2786)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 981 bp    Location:990825..961561   Strand:-
>bmy_10669
ATGACACGGTTTTCCACTTGGCCCTTTTCTTGGCAGGTCCCCGAGGGAAAAGTAGTAGTTCTTAATTTCCGATTCATAGACCTGGAGAGTGACAACCTGTGTCGCTATGACTTTGTGGACGTGTACAACGGCCACTCCAATGGCCAGCGCATCGGGCGCTTCTGCGGCACGTTCCGGCCCGGCGCTCTTGTGTCCAGCGGCAACAAGATGATGGGGATCAGTATTGTGGAGGACTCCTTGAAAGACCTTCCGGCTCTTTTAAAACCCCCAACTGGCCAGACCGCGATTACCCTGCAGGAGTCACTTCTTATAGAATTAAAGTTTGAGAAGTTTGATGTTGAGCGTGATAACTACTGCCGGTACGATTATGTGGCCGTGTTTAACGGTGGGGAGATCAACGACGCTGAAAGAATTGGGAAGTATTGTGGCGACAGCCCCCCTGCGCCAATTGTATCTGAGAGAAATGAACTTCTCATTCAGTTTTTATCAGACTTAAGTTTAACTGCAGATGGATTTATCGGTCACTACAAATTCAGGCCAAAGAAATTGCCGGCAACTACAGCACCACCTGTTACCACCACCTTTCCTGTGACTACAGGTTTAAAACCCACCGTGGCCCTGTGTCAGCAGAAGTGTAGACGGTCGGGGACTCTGGAGAGCAATTATTGCTTGAGTAACTTTGTCTTGGCCGGCACTGTTATCACCACCATCCCTCGAGGTGGGAGTTTGCACGCCACGGTCTCAATCATCAACATCTATAAAGAGGGAAATCTGGCAATTCAGCAGGCCGGCAAGAACATGAGTGCCAAGGTCATCGTGGTCTGCAAGCAGTGCCCACTCCTCAGAAGAGGTCTAAACTACATTATTATGGGCCAAGTGGGTGAAGATGGGCGAGGCAAAATCATGCCCAACAGCTTTATCATGATGTTCAAGACCAAGAATCAGAAGCTCCTGGACGCCTTGAAGAACAAGCAATGTTAA

Related Sequences

bmy_10669T0 Protein

Length: 327 aa      View alignments
>bmy_10669T0
MTRFSTWPFSWQVPEGKVVVLNFRFIDLESDNLCRYDFVDVYNGHSNGQRIGRFCGTFRPGALVSSGNKMMGISIVEDSLKDLPALLKPPTGQTAITLQESLLIELKFEKFDVERDNYCRYDYVAVFNGGEINDAERIGKYCGDSPPAPIVSERNELLIQFLSDLSLTADGFIGHYKFRPKKLPATTAPPVTTTFPVTTGLKPTVALCQQKCRRSGTLESNYCLSNFVLAGTVITTIPRGGSLHATVSIINIYKEGNLAIQQAGKNMSAKVIVVCKQCPLLRRGLNYIIMGQVGEDGRGKIMPNSFIMMFKTKNQKLLDALKNKQC*