Part of scaffold_563 (Scaffold)

For more information consult the page for scaffold_563 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRPF40A ENSTTRG00000004360 (Bottlenosed dolphin)

Gene Details

PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004114, Bottlenosed dolphin)

Protein Percentage 86.3%
cDNA percentage 86.8%
Ka/Ks Ratio 0.41025 (Ka = 0.0393, Ks = 0.0959)

PRPF40A ENSBTAG00000048151 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000054923, Cow)

Protein Percentage 95.46%
cDNA percentage 94.74%
Ka/Ks Ratio 0.18961 (Ka = 0.0307, Ks = 0.162)

Genome Location

Sequence Coding sequence

Length: 2787 bp    Location:78351..142224   Strand:+
>bmy_10689
ATGCTGCGTAGAGACGTGTCCTCCGACGTGCAGCGCAAGGCGCTGGATAAGATGTTCCAGAAACAGAAGTACATCAACAAGCCTGACCGCAAGAAGCTGGCGGCCAAGCTGGGCTTGAAAGACTCACGGATGGGGCACCCTGGCATGCATTATGCCCCAATGGGAATGCATCCTATGGGTCAGAGAGCGAATATGCCTCCTGTACCTCATGGAATGATGCCGCAAATGATGCCCCCAATGGGAGGACCACCAATGGGACAAATGCCTGGAATGATGTCTTCAGTAATGCCTGGAATGATGATGTCTCATATGTCTCAGGCTTCCATGCAGCCTGCCTTACCGAAATCAATGTGGACTGAACATAAATCACCTGATGGAAGGACCTACTACTATAATACTGAAACAAAACAGTCTACTTGGGAGAAACCAGATGATCTTAAAACTCCTGCTGAGCAACTTTTATCTAAATGCCCTTGGAAGGAATACAAATCTGACTCTGGAAAGCCCTACTATTACAATTCTCAAACAAAAGAATCCCGCTGGGCGAAACCTAAAGAACTTGAAGATCTTGAAGGATACCAGAATACCATTGTTGCTGGAAGTCTTATTACAAAATCAAACCTGCATGCAATGATCAAAGCTGAAGAAAGCAGTAAACAAGAAGAGTGCACCACATCAACAGCCCCAGTTCCTACAACAGAAATTCCAACCACAATGAGCACCATGGCTGCTGCAGAAGCAGCAGCTGCTGTTGTTGCAGCAGCAGCTGCAGCAGCAGCAGCTGCGGCTGCAGCCAATGCAAGTGCTTCCACCTCTGCTTCTAGTACTGTCGGTGGAACTGTTCCAGTTGTTCCTGAGCCTGAGGTTACTTCGATTGTTGCTACTGTTGTAGATAATGAAAATACAGTAACAATTTCGACTGAAGAACAAGCACAACTTACTAGTACCCCTGCTGTTCAGGATCAAAGTGTTGAAGTGTCTAGTAATACTGGAGAAGAAACATCTAAGCAGGAAACTGTAGCTGATTTTACTCCCAAAAAGGAGGAGGAAGAAAGCCAACCAGCAAAAAAAACATATACTTGGAATACAAAGGAGGAAGCAAAGCAAGCATTTAAAGAATTATTGAAGGAAAAGCGGGTACCATCTAATGCTTCATGGGAACAAGCTATGAAAATGATCATTAATGATCCACGATACAGTGCTTTAGCAAAGTTGAGTGAAAAAAAGCAGGCCTTTAATGCTTATAAAGTCCAGACAGAGAAAGAAGAAAAAGAAGAAGCAAGATCCAAATACAAAGAGGCTAAGGAATCCTTTCAGCGTTTTCTTGAAAATCATGAAAAAATGACTTCCACAACTAGATACAAAAAAGCAGAGCAAATGTTTGGAGAGATGGAAGTCTGGAATGCAATATCAGAACGTGATCGTCTTGAAATCTATGAAGATGTTTTATTCTTTCTTTCAAAAAAAGAAAAGGAGCAAGCAAAGCAGTTGCGAAAGAGAAATTGGGAAGCCTTAAAAAACATACTTGACAACATGGCTAACGTGACATACTCTACTACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAATCCAACTTTTGCAGAAGATGAAGAATTACAGAACATGGATAAAGAAGATGCGTTAATTTGCTTTGAAGAACACATTCGGGCTTTAGAAAAGGAAGAAGAAGAAGAAAAACAGAAGAGTTTGCTTCGGGAAAGGAGACGACAGCGTAAAAACAGAGAATCTTTTCAGATATTTTTAGATGAACTGCATGAACATGGACAACTGCATTCTATGTCATCTTGGATGGAATTGTATCCAACAATTAGTTCCGACATTAGATTCACTAATATGCTTGGTCAGCCGGGATCAACTGCACTTGACCTTTTCAAGTTTTATGTTGAGGATCTTAAAGCACGTTATCATGATGAGAAGAAGATAATAAAAGACATTCTAAAGGATAAAGGATTTGTAGTTGAAGTAAATACTACTTTTGAAGACTTTGTGGCAATAATCAGTTCGACTAAAAGATCAACCACATTAGATGCAGGAAATATTAAGTTGGCTTTCAATAGTTTACTAGAAAAGGCAGAAGCCCGTGAACGTGAAAGAGAAAAAGAGGAGGCTCGGAAGATGAAACGAAAAGAATCTGCATTTAAGAGTATGTTGAAACAAGCTACTCCTCCAATAGAATTGGATGCTGTCTGGGAAGATATCCGGGAGAGATTTGTAAAAGAGCCAGCATTTGAGGATATAACTCTAGAGTCTGAAAGAAAACGAATATTTAAAGATTTTATGCATGTGCTTGAGCATGAATGTCAACATCATCATTCAAAGAATAAGAAACACTCTAAGAAATCTAAAAAACATCACAGGAAACGCTCCCGCTCTCGATCAGGGTCAGATTCAGATGATGATGACAGCCATTCAAAGAAAAAAAGACAGCGATCAGAGTCTCGTTCTGCTTCAGAACATTCTTCTAGTGCTGAATCTGAGAGAAGTTATAAGAAATCAAAAAAACATAAGAAGAAAAGCAAGAAGAGAAGACATAAATCTGACTCTCCAGAGTCAGATGCTGAACGGGAGAAGGATAAAAAAGAAAAAGACCGGGAAAGCGAAAAAGACAGAACTAGACAAAGATCAGAGTCAAAACACAAATCACCTAAGAAAAAGACTGGAAAGGATTCTGGTAATTGGGATACTTCTGGCAGTGAACTGAGTGAAGGGGAATTGGAAAAGCGTAGAAGGACCCTTTTGGAGCAACTGGATGATGATCAATAA

Related Sequences

bmy_10689T0 Protein

Length: 929 aa      View alignments
>bmy_10689T0
MLRRDVSSDVQRKALDKMFQKQKYINKPDRKKLAAKLGLKDSRMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASASTSASSTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTSTPAVQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ*