Part of scaffold_566 (Scaffold)

For more information consult the page for scaffold_566 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPECC1 ENSTTRG00000017080 (Bottlenosed dolphin)

Gene Details

sperm antigen with calponin homology and coiled-coil domains 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016192, Bottlenosed dolphin)

Protein Percentage 62.87%
cDNA percentage 67.0%
Ka/Ks Ratio 0.35496 (Ka = 0.0921, Ks = 0.2594)

SPECC1 ENSBTAG00000000928 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000034915, Cow)

Protein Percentage 79.54%
cDNA percentage 82.56%
Ka/Ks Ratio 0.20547 (Ka = 0.1242, Ks = 0.6047)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1950 bp    Location:72686..75774   Strand:+
>bmy_10702
ATGTCAAAGTTTTCAAAGCACTCAGCCGTCAGACACTTAGCAGAGGACGCCACCCGCCTCCACTTCATCCCCTCGGATTCTGGGATGCTGGGAGATGCAGCTGCTCATGTCTCAGTAGCTGTCTTGGCAGTGGGTTCAGAGCTGTTTCGCCACAGTGGTTTCTGCTTCTGCCTCAGAAGACAGAGGCCTCTGCCAGCCTGTGGGCGCGTCCCTGCTTCCAACCCTCCCTACACAGCAGAGGCCTCCAGCCCACGGTGCAAACGGGCTGTGGCAGCAGCCAAGCGGACAGGCATTCCCACCCCTCGAGAACTCGCGGTAGCTGTCTCGAGAGAGAGAACGGTGCCACGCGGTCCCTCCAACTCCAGGAAAGCGGTATCCAGCCCCACCTCTTCCAGCACGCCCACCCCCACCAAGCACGTGCGGGCCACTCCCACGAGACCCAGGCCGGAGCACGAAGACGCAGAGAAGGCCGCGCTCGAGTCCCAGGTCCAGGAACTCTTGGCAGAAGCCAAAGAGAAAGATGGTGAAATTAACAGGCTCCGAAGTGAACTCAAGAAATGGATGGAGAAATGGACTCAGAACACCGAAGGGGCTGACGCTTTGGACCCAAGCGTGGACGGAGCGTCAGTCTTGCCGGGTGACTCGGAGCCTTTGATCAGAGCCCTCGAGGAGAAGAACAAGAACTTCCAGAAAGAGCTCGCTGAGCTTGAGGATGAAAACCGGGCCTTGAAGGAGAAACTGACTTATTTTGAGCATTCCCCAAATTCAGAGGGGGGAGCGAGTCACACCGGGGACAGCAGCTGCCGGACGTCGGTAACGCAGGAGTCCAGCTTCGGGAGCCCGATGGGAAATGAGTTGTCAGGCGAAATCGACGCGTATAAAAAAAACCCACACGAAGGTGTGTTGCGGACGTCGGGCTCTTCGAGCAGCGATGTCACCAAGGCTTCCTTGTCCCCGGACGCCTCCGACTTTGAGCACATCCCAGCAGACGCCCCCCCAGGGCCCCTGTCCCCCGCCGGGAGCCTGGTCAAGGGCTCCAAGTGCTTGGCGGCCGGCAGCTGCCCGCACACCGCGAGCGAGCTGTCCCTGGCGTCCCTGACGGAGAAGATCCACAGGATGGAAGAAAGCCACCACAGCACCGCCGAGGAGCTGCAGGCCACACTGCAGGAGCTGTCGGACCAGCAGCAGGTGGTGCAGGAACTGACGGCTGAAAACGAGAAGCTGACGGACGAGAAGACGCTCTTGGAAGCGTCCTTTCATCAGCATCGGGAGAGGGCGGAGCAGCTGAGTCAGGAGAACGAGAAGCTGATGGCCCTCCTGCAGGAGCGAGTCAAGGGCGAGGAGCCCGGCACCCAGGCAGGAAAAGTCCTGGAGCTGGAGCAGAAGTGCACGGAGGTCCTGGAGCAGGGCCGCTTCGAGCGAGAGAAGCTGCTCAACATCCAGCAGCAGCTGACCTGCCGTCTGAGGACGGTGGAGGAGGAGCACCGGGGGGCTCTGGAGACGGTCCGACACCTGAAGGAGGAGAACGGGAAACTGACCACCTTCCTGGAGCTGGAGCGGCGTGACAGCGGGGCGATGGCCAAGACCCTGGAGGAGTGTCGGGTTACCTTGGAAGGGCTCAAGGTGGAGAACGGGTCTCTGAAGGCTCACCTGGAGAATGAGAAGCCGAAAGCTGTAGAGACCAGCCCCCCGGGGCACACGGCCGAGGGCTGTGACGTTCAGGAGATGCTGACAGTGGCCCGAGCCGAGAAGGACCAGCTGGAACAGTCCTGCGCGGAGCTCAGACAGGAATTGCTRACGGCACATGGTGAGGTTAAGCGTGTCTCAAGCCTGCTGTCCAAGGTAAGGGGCGTTCTCTCTGCCAGTGTTTGCTCATCCTTGTCAACACAGCCCTCCTCGGCCTTTAGAGGCACACGGCACAGAGAACCAGGCCCTCGATTGCATTCGTAA

Related Sequences

bmy_10702T0 Protein

Length: 650 aa      View alignments
>bmy_10702T0
MSKFSKHSAVRHLAEDATRLHFIPSDSGMLGDAAAHVSVAVLAVGSELFRHSGFCFCLRRQRPLPACGRVPASNPPYTAEASSPRCKRAVAAAKRTGIPTPRELAVAVSRERTVPRGPSNSRKAVSSPTSSSTPTPTKHVRATPTRPRPEHEDAEKAALESQVQELLAEAKEKDGEINRLRSELKKWMEKWTQNTEGADALDPSVDGASVLPGDSEPLIRALEEKNKNFQKELAELEDENRALKEKLTYFEHSPNSEGGASHTGDSSCRTSVTQESSFGSPMGNELSGEIDAYKKNPHEGVLRTSGSSSSDVTKASLSPDASDFEHIPADAPPGPLSPAGSLVKGSKCLAAGSCPHTASELSLASLTEKIHRMEESHHSTAEELQATLQELSDQQQVVQELTAENEKLTDEKTLLEASFHQHRERAEQLSQENEKLMALLQERVKGEEPGTQAGKVLELEQKCTEVLEQGRFEREKLLNIQQQLTCRLRTVEEEHRGALETVRHLKEENGKLTTFLELERRDSGAMAKTLEECRVTLEGLKVENGSLKAHLENEKPKAVETSPPGHTAEGCDVQEMLTVARAEKDQLEQSCAELRQELLTAHGEVKRVSSLLSKVRGVLSASVCSSLSTQPSSAFRGTRHREPGPRLHS*