Sequence detailsbmy_10702 (Coding sequence)

Part of scaffold_566 (SequenceType object (1))

For more information consult the page for scaffold_566 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPECC1ENSTTRG00000017080 (Bottlenosed dolphin)

Gene Details

sperm antigen with calponin homology and coiled-coil domains 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016192, Bottlenosed dolphin)

Protein Percentage 62.87%
cDNA percentage 67.0%
Ka/Ks Ratio 0.35496 (Ka = 0.0921, Ks = 0.2594)

SPECC1ENSBTAG00000000928 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000034915, Cow)

Protein Percentage 79.54%
cDNA percentage 82.56%
Ka/Ks Ratio 0.20547 (Ka = 0.1242, Ks = 0.6047)

Additional orthologs identified in other species via the OPTIC pipeline.

SPECC1 (Human)   Specc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1950 bp    Location:72686..75774   Strand:+
Raw sequence 
>bmy_10702
ATGTCAAAGTTTTCAAAGCACTCAGCCGTCAGACACTTAGCAGAGGACGCCACCCGCCTCCACTTCATCCCCTCGGATTCTGGGATGCTGGGAGATGCAGCTGCTCATGTCTCAGTAGCTGTCTTGGCAGTGGGTTCAGAGCTGTTTCGCCACAGTGGTTTCTGCTTCTGCCTCAGAAGACAGAGGCCTCTGCCAGCCTGTGGGCGCGTCCCTGCTTCCAACCCTCCCTACACAGCAGAGGCCTCCAGCCCACGGTGCAAACGGGCTGTGGCAGCAGCCAAGCGGACAGGCATTCCCACCCCTCGAGAACTCGCGGTAGCTGTCTCGAGAGAGAGAACGGTGCCACGCGGTCCCTCCAACTCCAGGAAAGCGGTATCCAGCCCCACCTCTTCCAGCACGCCCACCCCCACCAAGCACGTGCGGGCCACTCCCACGAGACCCAGGCCGGAGCACGAAGACGCAGAGAAGGCCGCGCTCGAGTCCCAGGTCCAGGAACTCTTGGCAGAAGCCAAAGAGAAAGATGGTGAAATTAACAGGCTCCGAAGTGAACTCAAGAAATGGATGGAGAAATGGACTCAGAACACCGAAGGGGCTGACGCTTTGGACCCAAGCGTGGACGGAGCGTCAGTCTTGCCGGGTGACTCGGAGCCTTTGATCAGAGCCCTCGAGGAGAAGAACAAGAACTTCCAGAAAGAGCTCGCTGAGCTTGAGGATGAAAACCGGGCCTTGAAGGAGAAACTGACTTATTTTGAGCATTCCCCAAATTCAGAGGGGGGAGCGAGTCACACCGGGGACAGCAGCTGCCGGACGTCGGTAACGCAGGAGTCCAGCTTCGGGAGCCCGATGGGAAATGAGTTGTCAGGCGAAATCGACGCGTATAAAAAAAACCCACACGAAGGTGTGTTGCGGACGTCGGGCTCTTCGAGCAGCGATGTCACCAAGGCTTCCTTGTCCCCGGACGCCTCCGACTTTGAGCACATCCCAGCAGACGCCCCCCCAGGGCCCCTGTCCCCCGCCGGGAGCCTGGTCAAGGGCTCCAAGTGCTTGGCGGCCGGCAGCTGCCCGCACACCGCGAGCGAGCTGTCCCTGGCGTCCCTGACGGAGAAGATCCACAGGATGGAAGAAAGCCACCACAGCACCGCCGAGGAGCTGCAGGCCACACTGCAGGAGCTGTCGGACCAGCAGCAGGTGGTGCAGGAACTGACGGCTGAAAACGAGAAGCTGACGGACGAGAAGACGCTCTTGGAAGCGTCCTTTCATCAGCATCGGGAGAGGGCGGAGCAGCTGAGTCAGGAGAACGAGAAGCTGATGGCCCTCCTGCAGGAGCGAGTCAAGGGCGAGGAGCCCGGCACCCAGGCAGGAAAAGTCCTGGAGCTGGAGCAGAAGTGCACGGAGGTCCTGGAGCAGGGCCGCTTCGAGCGAGAGAAGCTGCTCAACATCCAGCAGCAGCTGACCTGCCGTCTGAGGACGGTGGAGGAGGAGCACCGGGGGGCTCTGGAGACGGTCCGACACCTGAAGGAGGAGAACGGGAAACTGACCACCTTCCTGGAGCTGGAGCGGCGTGACAGCGGGGCGATGGCCAAGACCCTGGAGGAGTGTCGGGTTACCTTGGAAGGGCTCAAGGTGGAGAACGGGTCTCTGAAGGCTCACCTGGAGAATGAGAAGCCGAAAGCTGTAGAGACCAGCCCCCCGGGGCACACGGCCGAGGGCTGTGACGTTCAGGAGATGCTGACAGTGGCCCGAGCCGAGAAGGACCAGCTGGAACAGTCCTGCGCGGAGCTCAGACAGGAATTGCTRACGGCACATGGTGAGGTTAAGCGTGTCTCAAGCCTGCTGTCCAAGGTAAGGGGCGTTCTCTCTGCCAGTGTTTGCTCATCCTTGTCAACACAGCCCTCCTCGGCCTTTAGAGGCACACGGCACAGAGAACCAGGCCCTCGATTGCATTCGTAA

Related Sequences

bmy_10702T0 SequenceType object (3)

Length: 650 aa      View alignments
>bmy_10702T0
MSKFSKHSAVRHLAEDATRLHFIPSDSGMLGDAAAHVSVAVLAVGSELFRHSGFCFCLRRQRPLPACGRVPASNPPYTAEASSPRCKRAVAAAKRTGIPTPRELAVAVSRERTVPRGPSNSRKAVSSPTSSSTPTPTKHVRATPTRPRPEHEDAEKAALESQVQELLAEAKEKDGEINRLRSELKKWMEKWTQNTEGADALDPSVDGASVLPGDSEPLIRALEEKNKNFQKELAELEDENRALKEKLTYFEHSPNSEGGASHTGDSSCRTSVTQESSFGSPMGNELSGEIDAYKKNPHEGVLRTSGSSSSDVTKASLSPDASDFEHIPADAPPGPLSPAGSLVKGSKCLAAGSCPHTASELSLASLTEKIHRMEESHHSTAEELQATLQELSDQQQVVQELTAENEKLTDEKTLLEASFHQHRERAEQLSQENEKLMALLQERVKGEEPGTQAGKVLELEQKCTEVLEQGRFEREKLLNIQQQLTCRLRTVEEEHRGALETVRHLKEENGKLTTFLELERRDSGAMAKTLEECRVTLEGLKVENGSLKAHLENEKPKAVETSPPGHTAEGCDVQEMLTVARAEKDQLEQSCAELRQELLTAHGEVKRVSSLLSKVRGVLSASVCSSLSTQPSSAFRGTRHREPGPRLHS*