Part of scaffold_566 (Scaffold)

For more information consult the page for scaffold_566 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NCOR1 ENSTTRG00000002022 (Bottlenosed dolphin)

Gene Details

nuclear receptor corepressor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001899, Bottlenosed dolphin)

Protein Percentage 89.34%
cDNA percentage 89.28%
Ka/Ks Ratio 0.22187 (Ka = 0.0133, Ks = 0.0602)

NCOR1 ENSBTAG00000013271 (Cow)

Gene Details

nuclear receptor corepressor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053758, Cow)

Protein Percentage 93.48%
cDNA percentage 89.35%
Ka/Ks Ratio 0.08964 (Ka = 0.0347, Ks = 0.3877)

NCOR1  (Minke Whale)

Gene Details

nuclear receptor corepressor 1

External Links

Gene match (Identifier: BACU005240, Minke Whale)

Protein Percentage 92.84%
cDNA percentage 93.68%
Ka/Ks Ratio 0.45618 (Ka = 0.0513, Ks = 0.1125)

Genome Location

Sequence Coding sequence

Length: 5484 bp    Location:301435..236944   Strand:-
>bmy_10709
TCTAGAGAAAACACCAAGGAAAAGGATAAGACAGAAAGTACCGCAGAAGAAACTGAGGAGAGAGAGCAGGCCACGCCCCGGGGCCGAAAGACCGCCAACAGTCAGGGCCGCCGAAAGGGCCGGGTCACCAGGTCCATGACCAGTGAGGCTGCGGCTGCCAGCGCTGCGGCTGCTGCAGCCACCGAGGAGCCACCCCCACCTCTGCCACCGCCGCCAGAACCCATTTCTGCAGAACCTGTAGAAACCTCTCGATGGACAGAAGAAGAAATGGAAGTTGCTAAAAAAGGTCTAGTAGAACATGGTCGTAACTGGGCAGCAATTGCCAAAATGGTGGGAACTAAAAGTGAAGCCCAATGTAAAAACTTCTATTTTAACTATAAGAGACGACACAATCTTGACAACCTCTTGCAGCAGCATAAACAGAAAGCCTCACGAAAGCCTCGTGAAGAGCGAGATGTGTCTCAGTGTGAAAGTGTAGCTTCTACCGTTTCTGCTCAGGAGGACGAGGACATCGAAGCCTCCAACGAAGAGGAAAATCCCGAGGACAGTGAAGGTGCTGAAAATAGTTCTGATACAGAAAGTGCTCCTTCTCCTTCACCAGTTGAAGCTGTCAAGCCCGGCGAAGACAGCACTGAAAACGCGCCTCCTCGAGGGACCATGGAGCCTGCGGCCGAACTGGAGGCCACACCCGACGCTGTGCCCAGGGCCTCTCCCTCGCCGGCAGTTCCGAGCACAAAAGCAGCCGAGGATGACAGTGTGGAGACCCAGGCGAACGACAGCATGGCAGTGGACACAGCAGAGCCGATGGATGTGGAGCACGAGGAGCGCGGGGCTGAAGGCATTTCCGCTCTGGACCTCCCCTCGGCTGCCAAGGCTGACGCTGTGGATGTTGAGATGCCAGAAAGCAGTCCCTCCAGAGTTGAAGGGGACCCCAAAGACAGAGACCTGGAGAGAAGCAGCGAGAAGCCGGAGCCTGGAGACGACGACCTAGGGGTGGCCCAGCAGATGAGCGCCCCGAGGCCCGAGCTCCCCTCTGACCATGACTCCAGTGCCACATGCAGTGCCGACGAGGATGTGGACGGGGAACCCGAGAGGCAGCGAATGTTTCCTGTGGATTCAAAACCTTCATTGTTAAACCCCACTGGATCTATACTGGTCTCGTCCCCAGTAAAACCAAATCCACTGGACCTGCCACAGCTTCAGCATCGAGCTGCTGTCATCCCGCCAATGGTTTCCTGCACCCCGTGTAACATACCGATCGGCACTCCAGTGAGCGGCTTCGCCCTGTACCAGCGACACATCAAAGCCATGCACGAGTCGGCGCTGCTGGAGGAGCAGCGGCAGAGGCAGGAGCAGGTGGACCTGGAGCGCAGGAGCGCTGCGAGCCCGCGGGGCGCCCCCAGGAGCCCGGGCAGAGAGTGGGAAGTCCTCCAGCCTGCTCCGCATCAAGTGATAACTAACCTCCCTGAAGGGGTTCGCCTTCCAACAACTCGACCCACGAGGCCACCTCCTCCTCTCATCCCATCATCCAAAACCACAGTGGCTTCAGAAAAACCGTCTTTTATACTGGGAGGCTCCATCTCACAGGGAACACCCGGCACTTACTTGCCTTCTCCTAATCAGGCCTCCTATGCTCCCGAGGCAGCGAAGCCCTCGGCGGGCTCCATCTCCCTGGGACTGCCGCGGCAGCAGGAGGTCGCCAAGCCAGCTACTGTGCCCTACATCAAGCAAGAAGAGTTTTCTCCCCGAAGCCAAAACTCACAACCTGAGGGTTTATTGGTCAGAGCCCAACATGAAGGAGTGGTCAGAGGTACCACAGGAGCCATTCAAGAAGGAAGTATAACTCGGGGAACTCCCTCCAGCAAACTTTCCGTGGAGAGCATCCCATCCCTCCGGGGCTCTATCACCCAGGGGACCCCGGCTCTGTCCCAGGCTGGCATACCAACTGAGGCTTTGGTAAAGGGACCCATTTCTAGACTGTCCATTGAAGAGAGCAGTCCTGAGAAAGGCCGAGAGGAAGCTGCATCCAAAGGCCATGTTATTTATGAAGGCAAAAGTGGACACATCTTATCTTACGATAATATTAAGAATGCCCGAGAAGGGACGAGGAGTCCGAGAACAGCTCATGAAATCAGTCTCAAAAGAAGCTATGAATCAGTGGAAGGAGCTCTAAAGCAAGGGTTGTCCATGAGGGAGTCTCCTGTGTCAGCACCGCTGGAGGGGCTGATCTGCCGAGCATTACCCAGGGGGAGCCCTCACTCTGACCTCAAAGAAAGGACTGTGCTGTCTGGTTCCATAATGCAGGGCACACCAAGAGCGACAACTGAAAGTTTTGAAGATGGCCTTAAGTACCCCAAACAGATTAAAAGGGAGAGTCCGCCCATACGAGCGTTTGAAGGTGCCATTACCAAAGGAAAACCTTACGATGGCATCACCACCATCAAAGAGATGGGGCGCTCCATCCATGAGATCCCACGGCAAGATGTTTTAACTCAGGAAAGCCAGAAAACCCCAGAAGTGGTGCAGAGCACGAGGCCCATGGTCGAGGGCTCCATCTCCCAGGGCACACCCGTCAAGTCTGACAGCGGCTCAGGCCAATCTGCCATCAAGCACAACGTCAAGTCCTTGGTCGCGGGGCCTAGCAGACTGCCCCGTGGGCTGCCTCCACTGGAGATTAGGCCAGAGAGCATAAAAGCGGTCGAACGGGGAAAATACGAGGACGTGAAAGCAGGCGAGCCTGTGCGTTCCCGGCACACGTCGGTGGTAAGCTCTGGCCCCTCGGTTCTCAGGTCAACGCTTCACGAAGCTCCCAAAGCACAGCTGAGCCCGGGGATTTACGAGGACGCCAGCGCACGGCGGACGCCGGGGAGTTACGCCAGCTCTGCATCCAGAGGCTCGCCCATGATGAGCAGAGCTCCCGATGTTACGATTTCTTCTAGCAAGCCTACCAATCATGAAAGGAAATCGACACTGACCCCTACCCAGAGGGAAAGCATCACAGCGAAGTCTCCAGTGCCTGGGGTAGACCCTGCAGTGAGCCACAGCCCTTTTGAGCCGCATCACAGGGGCGGTGCCCCAGGGGAGGTTTACCGGAGCCATCTGCCCACACATCTGGACCCAGCCATGCCGTTTCACCGGGCCCTGGATCCTGCTGCTGCTTACCTGTTCCAGAGACAGCTGTCACCAACTCCAGGTTACCCCAGTCAGTACCAGCTCTATGCGATGGAGAACACGCGGCAGACGATCCTCAACGACTACATCACCTCACAGCAGATGCAAGTGGGCCTGCGCCCGGACGTGGCCAGAGGGCTGTCGCCCCGGGAGCAGCAGCTGGGTCTTCCGTACCCAGCCACCAGGGGCATCATTGACCTGACCAATATGCCCCCAGCAATTTTAGTGCCTCATCCAGGGGGAACAAGCACTCCCCCCATGGACAGAATCACTTACATTCCTGGAACACAGGTCACCTTCCCTCCCCGGCCGTACAACTCTGCGTCCATGTCTCCAGGACACTCGACACACCTCGCTGCTGCGGCAAACGCTGAAAGAGAGCGGGAGCGGGAGAAGGAGCGGGAGCGCCTCGCCGCAGCCTCCTCGGACCTCTACCTGCGGCCAGGCTCGGAACAGCCCGGCCGGCCCAGCAGCCACGGCTACGTTCGCTCTCCGTCTCCTTCAGTCAGAGCTCAGGAGACCCTGCTGCAGCAGAGACCCAGCGTTTTCCAGGGAACCAACGGAACCAGTGTGATCACACCTTTGGACCCGAGCGCACAGCTACGGATCATGCCGCTGCCTGCTGGGGGCCCTTCCATCAGCCAGGGCCTGCCGGCCTCCCGTTACAATACTGCTGCGGACGCCCTGGCTGCTCTTGTGGACGCCGCAGCGTCTGCTCCCCAGATGGATGTGTCCAAAACAAAAGAGAGTAAGCATGAAGCTGCCAGGTTAGAAGACAATTTGAGGAGCAGGTCAGCAGCAGTTAGCGAGCAGCAGCTAGAGCAGAAAAGCCTGGAGGCGGAGAAGAGACCCGGTCAGTGTCTGTACACTTCTTCAGCCCTGCCGAGTGGCAAGCCCCAGCCTCATTCTGCAGTAGTTTACTCTGAGGCTGGGAAAGAGAAAGGGCCTCCTCCAAAATCCAGATATGAGGAAGAGCTAAGGACCCGAGGGAAGACTACCATTACCGCAGCTAACTTCATAGACGTGATCATCACCCGGCAAATTGCCTCGGACAAGGATGCAAGGGAACGTGGCTCCCAGAGTTCAGACTCTTCCGGTAGCTTATCTTCTCACCGGTATGAAACACCTGGCGATGCCATTGAGGTGATAAGCCCTGCCAGCTCCCCTGCACCGCCCCCCGAGAGGCTGCAGGCCTACCAGCCGGAGGTCATGAAGGCGAGCCAGGCAGAAAACGAAGCCTGCAGGCAGTACGAAGGACCGCTGCACCACTATCGGCCGCAGCCGGAGTCGCCCTCCCCGCAGCCGCCGCCGCCACCCCCGTCTTCACAGGCCGAGGGGGTGGGGCAGGTGCCCAGGACACACCGACTCATCACACTTGCTGATCACATCTGTCAAATTATCACGCAAGATTTTGCTAGAAATCAAGTTCCCTCACAGCCTCCCCAGCAGCCTCCCACTTCTACATTCCAAAGTTCACCGTCTGCTTTGGTGTCTACACCCGTGAGGACTAAAACATCAAACCGCTACAGCCCAGAATCCCAGTCTCAGTCTCTTCACCATCAAAGACCAGGTTCAAGGGTCTCTCCAGAAAATCTTGTGGACAAATCCAGGGGAAGTACCAGGCCTGGCAAGTCCCCAGAGAGGAGTCACGTCTCTAGCGAGCCCTACGAGCCCATCTCCCCACCCCAGGTTCCGGTCGTGCACGAGAAACAGGACAGCGTGCTGCTCCTGGCCCAGCGCGGAGCCGAGCCCGCGGAGCAGAGGAATGATTCCCGATCACCAGGGAGTATAAGCTACTTGCCTTCATTCTTCACCAAGCTGGAAAACACCTCACCCATGGTTAAATCAAAGAAGCAGGAGATCTTTCGTAAGTTGAACTCCTCTGGTGGAGGTGACTCTGATATGGGCTCCGTGAGCTCCCGAGGTCATTCCTTTGCTGACCCTGCCAGCAACCTCGGGCTGGAGGACATCATCCGGAAGGCTCTCATGGGGAGCTTTGAAGACAAAGTGGAGGACCACGGGGTCGCCATGCCCCAGCCCCTGGGGGGGGTGCCTGGTGGCGCCGGCACCTCGGTGGTGACCAGCGGTGAGGCCCGGAGAGAGGAAGGGGACCCGTCACCTCATTCAGGCTCGACGCAGTTCCCCTACAACCCCCTGACCATGCGGATGCTCAGCAGCACGCCCCCTGCGCCCGTCGCCTGTGCGCCTGCCTCTGCCAGCCCTGCCGCCCCTCACCAGCCGAGCAGGATCTGGGATCGGGAGCCGGCCCCGCTGCTCTCCGCGCAGTATGAGACGCTGTCCGACAGCGACTGA

Related Sequences

bmy_10709T0 Protein

Length: 1828 aa      View alignments
>bmy_10709T0
SRENTKEKDKTESTAEETEEREQATPRGRKTANSQGRRKGRVTRSMTSEAAAASAAAAAATEEPPPPLPPPPEPISAEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQKASRKPREERDVSQCESVASTVSAQEDEDIEASNEEENPEDSEGAENSSDTESAPSPSPVEAVKPGEDSTENAPPRGTMEPAAELEATPDAVPRASPSPAVPSTKAAEDDSVETQANDSMAVDTAEPMDVEHEERGAEGISALDLPSAAKADAVDVEMPESSPSRVEGDPKDRDLERSSEKPEPGDDDLGVAQQMSAPRPELPSDHDSSATCSADEDVDGEPERQRMFPVDSKPSLLNPTGSILVSSPVKPNPLDLPQLQHRAAVIPPMVSCTPCNIPIGTPVSGFALYQRHIKAMHESALLEEQRQRQEQVDLERRSAASPRGAPRSPGREWEVLQPAPHQVITNLPEGVRLPTTRPTRPPPPLIPSSKTTVASEKPSFILGGSISQGTPGTYLPSPNQASYAPEAAKPSAGSISLGLPRQQEVAKPATVPYIKQEEFSPRSQNSQPEGLLVRAQHEGVVRGTTGAIQEGSITRGTPSSKLSVESIPSLRGSITQGTPALSQAGIPTEALVKGPISRLSIEESSPEKGREEAASKGHVIYEGKSGHILSYDNIKNAREGTRSPRTAHEISLKRSYESVEGALKQGLSMRESPVSAPLEGLICRALPRGSPHSDLKERTVLSGSIMQGTPRATTESFEDGLKYPKQIKRESPPIRAFEGAITKGKPYDGITTIKEMGRSIHEIPRQDVLTQESQKTPEVVQSTRPMVEGSISQGTPVKSDSGSGQSAIKHNVKSLVAGPSRLPRGLPPLEIRPESIKAVERGKYEDVKAGEPVRSRHTSVVSSGPSVLRSTLHEAPKAQLSPGIYEDASARRTPGSYASSASRGSPMMSRAPDVTISSSKPTNHERKSTLTPTQRESITAKSPVPGVDPAVSHSPFEPHHRGGAPGEVYRSHLPTHLDPAMPFHRALDPAAAYLFQRQLSPTPGYPSQYQLYAMENTRQTILNDYITSQQMQVGLRPDVARGLSPREQQLGLPYPATRGIIDLTNMPPAILVPHPGGTSTPPMDRITYIPGTQVTFPPRPYNSASMSPGHSTHLAAAANAEREREREKERERLAAASSDLYLRPGSEQPGRPSSHGYVRSPSPSVRAQETLLQQRPSVFQGTNGTSVITPLDPSAQLRIMPLPAGGPSISQGLPASRYNTAADALAALVDAAASAPQMDVSKTKESKHEAARLEDNLRSRSAAVSEQQLEQKSLEAEKRPGQCLYTSSALPSGKPQPHSAVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDKDARERGSQSSDSSGSLSSHRYETPGDAIEVISPASSPAPPPERLQAYQPEVMKASQAENEACRQYEGPLHHYRPQPESPSPQPPPPPPSSQAEGVGQVPRTHRLITLADHICQIITQDFARNQVPSQPPQQPPTSTFQSSPSALVSTPVRTKTSNRYSPESQSQSLHHQRPGSRVSPENLVDKSRGSTRPGKSPERSHVSSEPYEPISPPQVPVVHEKQDSVLLLAQRGAEPAEQRNDSRSPGSISYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMGSVSSRGHSFADPASNLGLEDIIRKALMGSFEDKVEDHGVAMPQPLGGVPGGAGTSVVTSGEARREEGDPSPHSGSTQFPYNPLTMRMLSSTPPAPVACAPASASPAAPHQPSRIWDREPAPLLSAQYETLSDSD*