Part of scaffold_566 (Scaffold)

For more information consult the page for scaffold_566 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PIGL ENSTTRG00000002025 (Bottlenosed dolphin)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class L

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001902, Bottlenosed dolphin)

Protein Percentage 81.22%
cDNA percentage 81.77%
Ka/Ks Ratio 0.25086 (Ka = 0.1495, Ks = 0.596)

PIGL ENSBTAG00000013273 (Cow)

Gene Details

N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017653, Cow)

Protein Percentage 73.48%
cDNA percentage 77.72%
Ka/Ks Ratio 0.22189 (Ka = 0.1877, Ks = 0.8461)

PIGL  (Minke Whale)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class L

External Links

Gene match (Identifier: BACU005239, Minke Whale)

Protein Percentage 81.22%
cDNA percentage 84.35%
Ka/Ks Ratio 0.36746 (Ka = 0.1437, Ks = 0.3911)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 546 bp    Location:424645..433591   Strand:+
>bmy_10712
ATGTCTGCTCCCTCCCCCGGCCACGAGCCAAAGCCCCCAGAGCGTGTCGTGTTTCGTCCGGATGCCGCTGCCTCCCCCCTGCCCCCCACACCTACCGGAGCCCCGGGGGAAGCCTGCACCGGGGATTTCCCAGATGACCCCGGCGTGCGGTGGGACACCGAGCGGGTGGCCGACGTCCTCCTCCGGCACGTGGAAGCCAGCCGCATCAACCTGGTGGTGACCTTCGACGCGGGGGGTGTGAGCGGCCACAGCAACCACGTTGCTCTGTATGCGGCTGCCAGGACCCTGCATGCAGAAGGGAAGTTACCTAAAGGGTGCTCGGTGCTCACGCTCCGGTCTGTGAACCTGCTGCGCAAGTACCTCTCACTGCTGGACCTGCCCTGCTCCCTGCTGCTCGCCCGCGACGCCCTCTTCGTGCTCAGCCACCGAGAGGTGGCCCAGGCCCAGAGAGCCATGTCCTGCCACCGCAGCCAGCTGCTCTGGTTCCGCCACCTCTATGTGCTCTTCTCCCGCTACATGAGAATCAACTCCCTGCACTTCCTCTGA

Related Sequences

bmy_10712T0 Protein

Length: 182 aa      View alignments
>bmy_10712T0
MSAPSPGHEPKPPERVVFRPDAAASPLPPTPTGAPGEACTGDFPDDPGVRWDTERVADVLLRHVEASRINLVVTFDAGGVSGHSNHVALYAAARTLHAEGKLPKGCSVLTLRSVNLLRKYLSLLDLPCSLLLARDALFVLSHREVAQAQRAMSCHRSQLLWFRHLYVLFSRYMRINSLHFL*