Part of scaffold_566 (Scaffold)

For more information consult the page for scaffold_566 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRPV2 ENSBTAG00000003014 (Cow)

Gene Details

transient receptor potential cation channel subfamily V member 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003922, Cow)

Protein Percentage 85.2%
cDNA percentage 88.49%
Ka/Ks Ratio 0.15878 (Ka = 0.0732, Ks = 0.461)

TRPV2  (Minke Whale)

Gene Details

transient receptor potential cation channel, subfamily V, member 2

External Links

Gene match (Identifier: BACU005237, Minke Whale)

Protein Percentage 97.05%
cDNA percentage 97.34%
Ka/Ks Ratio 0.14181 (Ka = 0.014, Ks = 0.0986)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2034 bp    Location:518925..532586   Strand:+
>bmy_10715
ATGGCCTCGCCCTCCAGCCCTCCCGCTTTCAGGCTCGAGACGTCAGATGGAGGCCAAGAAAGTGGTGCCCAGGTGGACAGAGGAAAACTGGGCGGTGGTGCCAGGCCGCCCCCCATGGAGTCACCATTCCAGGGCGAGGACCGGAACTTCTCGCCTCAGATCAAAGTGAACCTCAGCTTCCGAAAGGCGGCAGGTGCCAGCCAGCCAGACCCAAACCGCTTCGACCGTGACCGGCTCTTCAGCGTGGTGGCCCGGGGGGTCCCCGAGGACCTGGTGGGGCTACCAGAGTACCTGCGCCGGACCAGCAAGTACCTCACCGACTCGGAGTACACAGAGGGCTCCACGGGGAAGACATGCCTGATGAAGGCCGTGCTGAACCTTCGGGACGGGACCAACGCCTGCATTGAGCCGCTGCTGCAGATTGACCGGGACTCCGGCAATCCTCGGCCTCTGGTCAATGCCCAGTGCACAGATGAGTACTACCAAGGCCACAGCGCCCTGCACATCGCCATCGAGAAGAGGAGCCTGCCGTGCGAGATGCCCCTCTCTCTGGCTGCGTGCACCAAGCAGTGGGACGTGGTGACCTATCTCCTGGAGAACCCGCACCAGCCCGCCAGCCTGCAGGCCGCCGACTCGCTGGGCAACACGGCCCTGCACGCCTTGGTGATGATCGCAGACAACTCGGCCGAGAACACAGAGCTGGTGACCCGCATGTACGACGGGCTGCTCCAGGCGGGGGCCCGCCTCTGCCCCGCGGTGCAGCTCGAGGACATCCCCAACCTGCAGGGCCTCACGCCCCTGAAGCTGGCCGCCAAGGAGGGCAAAATTGAGATTTTCAGACACATCCTGCAGCGGGAGTTCCTGGGGCCGAGCCAGTCCCTTTCCCGCAAGTTCACGGAGTGGTCTTACGGGCCTGTGCGGGTGTCGCTGTATGACCTGGCCTCTGTGGACAGCTGGGAGGAGAACTCAGTGCTGGAGATCATCGCCTTCCATTGCCAAAGCCCGGACTTCCTCCCGCTGGAAGTGACTGCTGGGAACTCCGTGCTGCTGCTGGGCCACATCCTGATCCTGGTCGTGGGGGCCAACATCCTCATGGGCCAGCTGTGGTACTTCTGGAGACGCCGTCTGTTCATCTGGATCTCGTTCATGGACAGCTACTTTGAAATCCTCTTCCTGGTCCAGGCGCTGCTCGCCGTGCTGTCCCAGGTGCTGTGCTTCCTGGCCATCGAGTGGTACCTGCCCCTGCACGTGTGCTCGCTGGCGCTGGCCTGGGTGAACTTGCTGTACTACATGCGCGGCTTGCAGCACACGGGCATCTACAGTGTCATGATCCAGAAGGTCATCCTGCGGGACCTGCTCCGCTTCCTCCTGGTCTACTTAGTCTTCCTTTTCGGCTTCGCTGTAGCACTGGTGAGCCTGAGCCGGGAGGCCCAGGACCCCGGGGCCCCTGCGGGCTCCAACAGCACGGAGGCGGCGGGCAAGGGGGACAAGGAGGGCAGCACGGCCCCGTACGAGGGCGTCCTGGACGCCGCCTTGGAGCTGTTCAAGTTCACCGTCGGCATGGGAGAGCTGGCCTTCCAGGACCGGCTGCGCTTCCGCGGGGCGGTGCTGCTGCTGCTTCTGGCCTACGTGCTGCTCACCTACGTCCTGCTGCTCAACATGCTCATCGCGCTCATGAACGAGACCGTCAGCAGCGTCGCCAGCGACAGCTGGAGCATCTGGAAGCTGCAGAAAGCCATCTCTGTCCTGGAGATGGAGAACGGCTACTGGTGGTGCAGGAGGAAGAAGCAGCGGGCAGGTGTGAGACTGACAGTTGGCACCAGGCCGGACGGTCGCCCCGACGAGCGCTGGTGCTTCAGGGTAGAGGAGGTGAACTGGGCTGCGTGGGAGCAGACGCTGCCCACGGTGCGCGAGGAGCCCTCGGGGCCAGGCGGCCCTGGCGCCCTGAAGAACCCAGCCCTGGCCTCCCAATCCAGCCAGGACAGTGCCGTGGAGGAAGACCACGTGCCCCTCCAGCTCCTTGAGTCCCACTGA

Related Sequences

bmy_10715T0 Protein

Length: 678 aa      View alignments
>bmy_10715T0
MASPSSPPAFRLETSDGGQESGAQVDRGKLGGGARPPPMESPFQGEDRNFSPQIKVNLSFRKAAGASQPDPNRFDRDRLFSVVARGVPEDLVGLPEYLRRTSKYLTDSEYTEGSTGKTCLMKAVLNLRDGTNACIEPLLQIDRDSGNPRPLVNAQCTDEYYQGHSALHIAIEKRSLPCEMPLSLAACTKQWDVVTYLLENPHQPASLQAADSLGNTALHALVMIADNSAENTELVTRMYDGLLQAGARLCPAVQLEDIPNLQGLTPLKLAAKEGKIEIFRHILQREFLGPSQSLSRKFTEWSYGPVRVSLYDLASVDSWEENSVLEIIAFHCQSPDFLPLEVTAGNSVLLLGHILILVVGANILMGQLWYFWRRRLFIWISFMDSYFEILFLVQALLAVLSQVLCFLAIEWYLPLHVCSLALAWVNLLYYMRGLQHTGIYSVMIQKVILRDLLRFLLVYLVFLFGFAVALVSLSREAQDPGAPAGSNSTEAAGKGDKEGSTAPYEGVLDAALELFKFTVGMGELAFQDRLRFRGAVLLLLLAYVLLTYVLLLNMLIALMNETVSSVASDSWSIWKLQKAISVLEMENGYWWCRRKKQRAGVRLTVGTRPDGRPDERWCFRVEEVNWAAWEQTLPTVREEPSGPGGPGALKNPALASQSSQDSAVEEDHVPLQLLESH*