Sequence details bmy_10729 (Coding sequence)

Part of scaffold_566 (Scaffold)

For more information consult the page for scaffold_566 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PMP22 ENSTTRG00000003678 (Bottlenosed dolphin)

Gene Details

peripheral myelin protein 22

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003451, Bottlenosed dolphin)

Protein Percentage 98.75%
cDNA percentage 97.71%
Ka/Ks Ratio 0.06031 (Ka = 0.0055, Ks = 0.0916)

PMP22 ENSBTAG00000019070 (Cow)

Gene Details

Peripheral myelin protein 22

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025389, Cow)

Protein Percentage 95.0%
cDNA percentage 90.83%
Ka/Ks Ratio 0.05754 (Ka = 0.028, Ks = 0.4874)

PMP22  (Minke Whale)

Gene Details

peripheral myelin protein 22

External Links

Gene match (Identifier: BACU005226, Minke Whale)

Protein Percentage 99.38%
cDNA percentage 98.54%
Ka/Ks Ratio 0.045 (Ka = 0.0027, Ks = 0.0603)

Additional orthologs identified in other species via the OPTIC pipeline.

PMP22 (Human)   Pmp22 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 498 bp    Location:1015684..1039438   Strand:+
Raw sequence 
>bmy_10729
ATGCTGCTTCTGCTGCTGGGTATCATCGTTCTCCACGTCGCGGTGCTCGTGCTGCTGTTCGTCTCCACGATCGTCAGCCAATGGATGGTGGGCAATGGACACGCGACCGACCTCTGGCAAAACTGTAGCACCTCTTCGTTGAGCAACGTCCAACACTGTTTCACATCCTCAGCAAACGTGTCTCCTCCCTCAGAATGGCTGCAGTCTGTCCAGGCCACCATGATCCTGTCCATCATTTTCAGCGTTCTGTCCCTGTTCCTGTTCTTCTGCCAGCTCTTCACCCTCACCAAGGGGGGCCGGTTTTACATCACCGGAGTCTTCCAGATCCTCGCTGGTCTGTGTGTGATGAGCGCGGCATCCATCTACACGGTCAGGCACCCGGAATGGCATCCCAACTCGGAGAACTCCTACGGCTTTGCCTACATCCTGGCTTGGGTGGCCTTCCCACTGGCCCTCCTCAGCGGCGTCATCTATGTGATCTTGCGGAAACGTGAATGA

Related Sequences

bmy_10729T0 Protein

Length: 166 aa      View alignments
>bmy_10729T0
MLLLLLGIIVLHVAVLVLLFVSTIVSQWMVGNGHATDLWQNCSTSSLSNVQHCFTSSANVSPPSEWLQSVQATMILSIIFSVLSLFLFFCQLFTLTKGGRFYITGVFQILAGLCVMSAASIYTVRHPEWHPNSENSYGFAYILAWVAFPLALLSGVIYVILRKRE*