Sequence detailsbmy_10729 (Coding sequence)

Part of scaffold_566 (SequenceType object (1))

For more information consult the page for scaffold_566 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PMP22ENSTTRG00000003678 (Bottlenosed dolphin)

Gene Details

peripheral myelin protein 22

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003451, Bottlenosed dolphin)

Protein Percentage 98.75%
cDNA percentage 97.71%
Ka/Ks Ratio 0.06031 (Ka = 0.0055, Ks = 0.0916)

PMP22ENSBTAG00000019070 (Cow)

Gene Details

Peripheral myelin protein 22

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000025389, Cow)

Protein Percentage 95.0%
cDNA percentage 90.83%
Ka/Ks Ratio 0.05754 (Ka = 0.028, Ks = 0.4874)

PMP22 (Minke Whale)

Gene Details

peripheral myelin protein 22

External Links

Gene match (Identifier: BACU005226, Minke Whale)

Protein Percentage 99.38%
cDNA percentage 98.54%
Ka/Ks Ratio 0.045 (Ka = 0.0027, Ks = 0.0603)

Additional orthologs identified in other species via the OPTIC pipeline.

PMP22 (Human)   Pmp22 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 498 bp    Location:1015684..1039438   Strand:+
Raw sequence 
>bmy_10729
ATGCTGCTTCTGCTGCTGGGTATCATCGTTCTCCACGTCGCGGTGCTCGTGCTGCTGTTCGTCTCCACGATCGTCAGCCAATGGATGGTGGGCAATGGACACGCGACCGACCTCTGGCAAAACTGTAGCACCTCTTCGTTGAGCAACGTCCAACACTGTTTCACATCCTCAGCAAACGTGTCTCCTCCCTCAGAATGGCTGCAGTCTGTCCAGGCCACCATGATCCTGTCCATCATTTTCAGCGTTCTGTCCCTGTTCCTGTTCTTCTGCCAGCTCTTCACCCTCACCAAGGGGGGCCGGTTTTACATCACCGGAGTCTTCCAGATCCTCGCTGGTCTGTGTGTGATGAGCGCGGCATCCATCTACACGGTCAGGCACCCGGAATGGCATCCCAACTCGGAGAACTCCTACGGCTTTGCCTACATCCTGGCTTGGGTGGCCTTCCCACTGGCCCTCCTCAGCGGCGTCATCTATGTGATCTTGCGGAAACGTGAATGA

Related Sequences

bmy_10729T0 SequenceType object (3)

Length: 166 aa      View alignments
>bmy_10729T0
MLLLLLGIIVLHVAVLVLLFVSTIVSQWMVGNGHATDLWQNCSTSSLSNVQHCFTSSANVSPPSEWLQSVQATMILSIIFSVLSLFLFFCQLFTLTKGGRFYITGVFQILAGLCVMSAASIYTVRHPEWHPNSENSYGFAYILAWVAFPLALLSGVIYVILRKRE*