Part of scaffold_578 (Scaffold)

For more information consult the page for scaffold_578 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ESF1 ENSTTRG00000005335 (Bottlenosed dolphin)

Gene Details

ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005053, Bottlenosed dolphin)

Protein Percentage 95.79%
cDNA percentage 97.76%
Ka/Ks Ratio 0.47581 (Ka = 0.0187, Ks = 0.0394)

ESF1 ENSBTAG00000007130 (Cow)

Gene Details

ESF1 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009384, Cow)

Protein Percentage 87.25%
cDNA percentage 92.28%
Ka/Ks Ratio 0.43792 (Ka = 0.0671, Ks = 0.1533)

ESF1  (Minke Whale)

Gene Details

ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU000654, Minke Whale)

Protein Percentage 96.83%
cDNA percentage 98.39%
Ka/Ks Ratio 0.64729 (Ka = 0.0144, Ks = 0.0222)

Genome Location

Sequence Coding sequence

Length: 1989 bp    Location:60569..38275   Strand:-
>bmy_10736
ATGCGCCGCGGCTTCAGCGAGGACTCTGGAGAGCTTCGCCGAGGGAAAGCGGAAGAAGTTTGGCCAGTTCGCGTGCCATTACGGCTGCGCGTCACGCTGAGGATTGTGGGAGTGGCGGCTCACGTGAGGCTCGGAGAGGTCTCGGAGTTGTGTTTGSTTTCTTCAAGCATTTGCCCAGTCAGACATTTAAAAATGGCATCCAAACAAGAAATAATGAGTGACCAGCGGTTTAGGCGGGTTGCAAAGGACCCGAGATTTTGGGAAATGCCAGAAAAGGATCGAAAAATCAAAATTGACAAGAGATTTCGAGCAATGTTTCATGACAAAAAGTTCAAATTGAATTATGCTGTGGATAAAAGAGGACGCCCCATCAATCATAGCACTACAGAGGACTTGAAGCGTTTTTACGACCTTTCAGATTCTGATTCGGATTTCTCTGATAAAGATAATAAAGCATTGAAGCAAAAGAAAATGAAGAAGAAAAAACCCCAGAATAAAAACGAAAAAGAATCAAAAAATCTTGCTGAGGAGAAAAAGAAAGAAACCAAGAAAATTAATCAAAAGGATTCTGGAAAGAAGAATGATTTAGATAACTCTGGGAGAATTCAGAAAATGAAAACCTCATGCAAATCTAAGAAGATAGAGTCAATAAGTCCCAAGAACGATAGCAAAGAATTTATACAAAAAAGTACAAAAGGGAAAAAAACCATTGTTCAACATAATACAGACTTGTTTCCCAAAGGAAAATTAAGAACAGTAGACTCAGGCACCTCTGAAATTGCGCAGTCTCCCAAAGTCAAGTATTCTGAGACAGGAAGAGAAATGCAGTCAGTGGTTCCATTCATAATGGCAAGAGACAGTGATGGTCATGAAAACTCAGCAAGTGGTAAAATGTTTGACAAAGAAGCTCTGGAGGAAGAAAGTGCTAGTGAAATGGGAGGTGATGAAGAATCTGAAGATGAAATTACAGGCATTTGTAGAGCTGTTGCTGCTGGTCTTCATGATGATGATGGTGATGATGATGATGGAGGGAATGAAAATGATGAGGAGGAAGATGAAGATGAGGATAGTGAGGATGATGATGAAAGTGACAGTGGCCCCGATCTTGCGAGGGGCAAAGGAAATATAGAAACCAGTTCCGAAGATGAAGAAGATATGGCATATTTACTTCCAGAGGAATCTGGTTTTGAGCATGCTTGGAGAGAATTAGATAAAGATGCTCCTCGGGCTGATGAGATTACGCATCGATTAGCAGTTTGCAACATGGACTGGGATAGATTGAAGGCAAAAGATTTGCTGGCTTTGTTCAATTCATTTAAACCTAAAGGAGGTGTTATATTTTCTGTAAAGATATATCCTTCAGAATTTGGAAAGGAGAGGATGAAGGAAGAGCAAGTTCAAGGACCAGTAGAGACCTGTAGAGAAAAACTGAGAGATTATCAATTCAAACGACTGAAGTACTATTATGCAGTAGTAGACTGTGATTCTCTTGAAACAGCCGCTAAAATTTATGAGGATTGTGATGGCCTGGAATTCGAAAGTAGTTGCTCGTTCATAGATCTAAGGTTTATACCAGATGATATTACTTTTGATGATGAGCCCAAGGATGTAGCCTCAGAAGTGGATTTAACAGCATATAAGCCAAGATATTTCACATCTGCTGCAATGGGAACATCAACGGTGGAGATCACTTGGGATGAGACAGATCATGAAAGAATTACAACACTCAACAGGAAATTTAAAAAGGAAGAGCTTTTGGACATGGATTTTCAAGCCTACTTAGCTTCCTCTAGTGAAGATGAAGAAGAGATAGAAGAGGAGCTACAAGGTGATGATGGAGTCAGTGTAGAAGAAGATGGGAAAACAAAAAGAAGCCAGAAGGATGATGAAGACCAAATTGCTAAATATAGGCAGCTCTTGCATGTTATTCAAGAAAAAGAAAAGAAAGGCAAAGAAAATGATATGGAAATGGAAATTAAGTGGGTTCCA

Related Sequences

bmy_10736T0 Protein

Length: 663 aa      View alignments
>bmy_10736T0
MRRGFSEDSGELRRGKAEEVWPVRVPLRLRVTLRIVGVAAHVRLGEVSELCLXSSSICPVRHLKMASKQEIMSDQRFRRVAKDPRFWEMPEKDRKIKIDKRFRAMFHDKKFKLNYAVDKRGRPINHSTTEDLKRFYDLSDSDSDFSDKDNKALKQKKMKKKKPQNKNEKESKNLAEEKKKETKKINQKDSGKKNDLDNSGRIQKMKTSCKSKKIESISPKNDSKEFIQKSTKGKKTIVQHNTDLFPKGKLRTVDSGTSEIAQSPKVKYSETGREMQSVVPFIMARDSDGHENSASGKMFDKEALEEESASEMGGDEESEDEITGICRAVAAGLHDDDGDDDDGGNENDEEEDEDEDSEDDDESDSGPDLARGKGNIETSSEDEEDMAYLLPEESGFEHAWRELDKDAPRADEITHRLAVCNMDWDRLKAKDLLALFNSFKPKGGVIFSVKIYPSEFGKERMKEEQVQGPVETCREKLRDYQFKRLKYYYAVVDCDSLETAAKIYEDCDGLEFESSCSFIDLRFIPDDITFDDEPKDVASEVDLTAYKPRYFTSAAMGTSTVEITWDETDHERITTLNRKFKKEELLDMDFQAYLASSSEDEEEIEEELQGDDGVSVEEDGKTKRSQKDDEDQIAKYRQLLHVIQEKEKKGKENDMEMEIKWVP