Part of scaffold_583 (Scaffold)

For more information consult the page for scaffold_583 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UPF3B ENSTTRG00000011424 (Bottlenosed dolphin)

Gene Details

UPF3 regulator of nonsense transcripts homolog B (yeast)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010832, Bottlenosed dolphin)

Protein Percentage 86.14%
cDNA percentage 87.5%
Ka/Ks Ratio 0.55395 (Ka = 0.0193, Ks = 0.0348)

UPF3B ENSBTAG00000035615 (Cow)

Gene Details

regulator of nonsense transcripts 3B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027792, Cow)

Protein Percentage 97.41%
cDNA percentage 95.43%
Ka/Ks Ratio 0.08122 (Ka = 0.0159, Ks = 0.1952)

UPF3B  (Minke Whale)

Gene Details

UPF3 regulator of nonsense transcripts homolog B (yeast)

External Links

Gene match (Identifier: BACU007512, Minke Whale)

Protein Percentage 99.78%
cDNA percentage 99.7%
Ka/Ks Ratio 0.08434 (Ka = 0.0009, Ks = 0.0107)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1362 bp    Location:865516..849825   Strand:-
>bmy_10757
ATGAGGAGCGAAACCGTGGCCATGAAGGAGGAGAAGGAGCATAGGCCTAAGGAGAAGCGAGTAACCCTCTTGACTCCCCCGGGGGCCACAGGCAGCGTCTGTGGGGCTTCGGGGGACAGCATCAAAGGGGAAGATAAGCAGGATCGGAACAAGGAGAAGAAAGAGGCGTTGAGCAAGGTGGTAATACGGAGATTACCGCCCACTTTGACCAAGGAGCAGCTTCAGGAACATCTTCAGCCTATGCCTGAGCATGATTATTTTGAGTTTTTTTCTAATGATACTAGCCTGTATCCTCATATGTATGCCAGAGCATACATCAACTTTAAAAACCAGGAGGACATTATTTTGTTCAGGGATCGTTTCGATGGTTATGTATTCCTTGACAATAAAGGTCAGGAATATCCTGCCATAGTAGAATTTGCACCTTTTCAAAAAGCTGCAAAAAAGAAGACTAAGAAAAGAGATACTAAAGTTGGGACTATCGATGATGCTAAAAAGACAACCCCACTTTTGAGCTTCCTGAAAAACAAGCAGAGGATGAGAGAAGAAAAGAGAGAAGAAAGAAGGAGGCGAGAAATAGAAAGAAAAAGACAAAGAGAAGAAGAGAGGAGGAAATGGAAAGAAGAAGAGAAACGAAAAAGGAAAGATATAGAAAAGCTAAAGAAGATAGACAGAGTTCCAGAAAGGGACAAATTAAAGGATGAACCAAAGATTAAGGTACACAGGTTTCTGTTACAAGCTGTGAATCAGAAAAATCTGCTCAAGAAGCCAGAAAAAGGCGATGAAAAAGAATTGGACAAAAGAGAAAAGGCCAAGAAATTGGACAAAGAGAATCTGAGTGATGAAAGAGCCAGTGGGCAGAGTTGTCCATTGCCCAAACGTTCTGATGGTGAATTTAAAGATGAAAAGCCTAAGAGACCTGAAGATGAGAGTGGCAGAGAATACAGGGAGAGGGAGCGGGATTATGAACGAGACCAAGAGCGCATACTGCGGGAAAGAGAGAGGCTGAAGCGGCAGGAGGAAGAGCGCCGCAGGCAGAAGGAGCGCTATGAGAAAGAGAAGGCTTTTAAAAGAAAGGAAGAAGAAATGAAAAAAGAGAAAGAAGCCCTTCGGGATAAAGGAAAGAAGCCTGAAAGTACAGAACCAGTAGGCAGCTCAGAAAAAACTGAAAAGAAAGAGGAAGTGGTTAAGAGAGATCGCATAAGAAACAAGGATCGCCCAGCAATGCAGCTTTACCAACCCGGAGCTCGAAGCCGAAATCGACTCTGTCCSCATGATGACAGCACCAAGTCTGGAGATTCAACCATAGAAAAAAAGCAGGAAAGTGGTATTAGCCATAGAAAAGAAGGAAGCGAGGAGTGA

Related Sequences

bmy_10757T0 Protein

Length: 454 aa      View alignments
>bmy_10757T0
MRSETVAMKEEKEHRPKEKRVTLLTPPGATGSVCGASGDSIKGEDKQDRNKEKKEALSKVVIRRLPPTLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFLDNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEEKRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREKAKKLDKENLSDERASGQSCPLPKRSDGEFKDEKPKRPEDESGREYRERERDYERDQERILRERERLKRQEEERRRQKERYEKEKAFKRKEEEMKKEKEALRDKGKKPESTEPVGSSEKTEKKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPHDDSTKSGDSTIEKKQESGISHRKEGSEE*