Sequence detailsbmy_10790 (Coding sequence)

Part of scaffold_570 (SequenceType object (1))

For more information consult the page for scaffold_570 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRAPPC3ENSTTRG00000015098 (Bottlenosed dolphin)

Gene Details

trafficking protein particle complex 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014312, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.57%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0134)

TRAPPC3ENSBTAG00000005732 (Cow)

Gene Details

trafficking protein particle complex subunit 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000040408, Cow)

Protein Percentage 79.47%
cDNA percentage 81.46%
Ka/Ks Ratio 0.42046 (Ka = 0.1726, Ks = 0.4105)

Additional orthologs identified in other species via the OPTIC pipeline.

TRAPPC3 (Human)   Trappc3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 465 bp    Location:392120..381557   Strand:-
Raw sequence 
>bmy_10790
ATGTCGAGGCAGGCGAACCGTGGCACCGAGAGCAAGAAAATGAGCTCTGAGCTCTTCACCCTGACCTATGGGGCTCTAGTCACCCAGCTGTGCAAGGACTATGAAAATGATGAAGATGTGAATAAACAGCTGGACAAAATGGGCTATAACATTGGAGTCCGACTGATTGAAGATTTCTTGGCACGGTCAAATGTCGGGAGGTGCCATGACTTTCGGGAAACTGCAGATGTCATTGCCAAGGTGGCGTTCAAGATGTACTTGGGCATCACTCCAAGCATCACCAATTGGAGCCCAGCTGGTGACGAATTCTCCCTCATCTTGGAAAATAATCCCTTGGTGGACTTTGTCCAGATGGCTGTGGAGGCCAAATTTGTCCAGGACACCCTGAAAGGAGACGGTGTGACAGAAATCCGGATGAGGTTCATCAGGCGGATTGAGGACAACCTCCCAGCTGGAGAGGAATGA

Related Sequences

bmy_10790T0 SequenceType object (3)

Length: 155 aa      View alignments
>bmy_10790T0
MSRQANRGTESKKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGYNIGVRLIEDFLARSNVGRCHDFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLPAGEE*