Part of scaffold_570 (SequenceType object (1))

For more information consult the page for scaffold_570 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OSCP1ENSTTRG00000011942 (Bottlenosed dolphin)

Gene Details

organic solute carrier partner 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011326, Bottlenosed dolphin)

Protein Percentage 75.69%
cDNA percentage 80.65%
Ka/Ks Ratio 0.70421 (Ka = 0.1666, Ks = 0.2366)

OSCP1ENSBTAG00000007994 (Cow)

Gene Details

Protein OSCP1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010509, Cow)

Protein Percentage 85.77%
cDNA percentage 86.17%
Ka/Ks Ratio 0.19787 (Ka = 0.091, Ks = 0.46)

OSCP1 (Minke Whale)

Gene Details

organic solute carrier partner 1

External Links

Gene match (Identifier: BACU009676, Minke Whale)

Protein Percentage 93.92%
cDNA percentage 94.3%
Ka/Ks Ratio 0.47478 (Ka = 0.0493, Ks = 0.1039)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 792 bp    Location:631098..603283   Strand:-
>bmy_10798
ATGTCGGTGCGGACGCTACCGCTGCTCTTCTTGAACCTGGGTGGGGAGATGCTTTACATCCTGGATCAGCGGCTGCGGGCCCAGAACATCCCGGGAGACAAGGCCCGAAAAGATGAATGGACAGAGGTGGACAGAAAACGAGTTCTGAATGACATCATCTCAACCATGTTCAATCGAAAGTTTATGGAGGAATTGTTCAAACCCCAAGAGCTCTACTCCAAAAAGGCCCTGAGGACAGTCTACGACCGCCTGGCTCACGCCTCCATCATGAGACTAAACCAGGCCAGCATGGATAAGCTCTATGACCTGATGACAATGGCTTTCAAATATCAAGTATTGCTGTGTCCTCGTCCCAAGGATGTGTTGCTGGTCACTTTCAATCATTTAGATGCCATCAAGGGATTCATCCAAGACTCCCCAACCATCCTGCATCAAGTGGATGAGACTTTCCAGCAGCTGACTGAAACATACGGGGGTCTCTCTGCGGGGGAGTTCCAGCTGATCCGGCAGACGCTCCTCATCTTCTTCCAGGACCTGCACATCAGAATACACAGCATGCAGAGCCCCGACGTTTCCAAAGGGCACCTCAGATTTCCCAACATAAGGTACAGTGTGAACCGGCCCGTGGAAACCCATATGTCTGGAGCATCAGAGAACTTAGCTGCACAGACACAGGACCAGCAGACGAACAAAGAGCTGGCTCGGATCATGGGGGAGTTTGAGATCTTGGACCAGCCAAGGCGGAGTGCCAGCAAGGGCGATGATTTGCTTGCCATGATGGATGAGTTATAG

Related Sequences

bmy_10798T0 SequenceType object (3)

Length: 264 aa      View alignments
>bmy_10798T0
MSVRTLPLLFLNLGGEMLYILDQRLRAQNIPGDKARKDEWTEVDRKRVLNDIISTMFNRKFMEELFKPQELYSKKALRTVYDRLAHASIMRLNQASMDKLYDLMTMAFKYQVLLCPRPKDVLLVTFNHLDAIKGFIQDSPTILHQVDETFQQLTETYGGLSAGEFQLIRQTLLIFFQDLHIRIHSMQSPDVSKGHLRFPNIRYSVNRPVETHMSGASENLAAQTQDQQTNKELARIMGEFEILDQPRRSASKGDDLLAMMDEL*