Sequence detailsbmy_10806 (Coding sequence)

Part of scaffold_575 (SequenceType object (1))

For more information consult the page for scaffold_575 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CWH43ENSTTRG00000012605 (Bottlenosed dolphin)

Gene Details

cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011961, Bottlenosed dolphin)

Protein Percentage 82.7%
cDNA percentage 84.92%
Ka/Ks Ratio 0.72811 (Ka = 0.0222, Ks = 0.0305)

CWH43ENSBTAG00000021347 (Cow)

Gene Details

PGAP2-interacting protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028457, Cow)

Protein Percentage 90.53%
cDNA percentage 91.34%
Ka/Ks Ratio 0.20945 (Ka = 0.0467, Ks = 0.2228)

CWH43 (Minke Whale)

Gene Details

cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)

External Links

Gene match (Identifier: BACU008754, Minke Whale)

Protein Percentage 67.81%
cDNA percentage 74.28%
Ka/Ks Ratio 0.69851 (Ka = 0.2947, Ks = 0.422)

Additional orthologs identified in other species via the OPTIC pipeline.

CWH43 (Human)   Cwh43 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1743 bp    Location:179761..132987   Strand:-
Raw sequence 
>bmy_10806
AGCATAGCCTCCTTTCAGGCTCCAAATGCCAAACTTCGGCTCGTGGTTCTCGCGCTCGGTCTGTCTTCCTCACTGGTAGTGCAAGCCGTGACATGGTGGACAGGAAGTGGTTTGCAAAGGTACTTCAGAATCTGGGGATTCATTTTAGGGCAGATTCTTCTTCTTGTTCTCCGCATTTGGTACACTTCACTGAACCCAGTCTGGACTTATCAGATGTCCAAAAGAGTGATACTGACATTAAGTACCATCGCCACACTTGATCGCATTTACACAGATGGTGCCTGCTGTAGACCTGAGGGGAAGAAGTCTGGTGAGGCAGCCAGGGTGATGGCTTCTAGACCGAACTGGTTGTTGGCAGGGGCTGCCTTTGGCAGTCTCATGTTTCTTACCCACTGGATTTTTGGAGAAGTCTCTGTTGTTTCCAGATGGGCAGTGAGTGGGCATCCCCATCCAGGGCCAGATCCTAACCCATTTGGAAGTGCAGTTCTGCTGGGCTTGGCGAGTGGATTGATGCTTTCGCCTTGTTCATGGTTTCCTGGTTCCAGTTTAACCTGGTGGATGACAGGAGCGACCTCGGCTGTGGGTCTCCTTTACCTGCCCACATGGGCAGCCGCTCTCTCTGGCTGTGTGCTTGCCCTCTTCACGGCGTCCATGTGGCCTCAAGTGCTTGGACACCTTATCAGCTCAGGGTCAGGCCCTGGGAAAGCCATGACCACTGCCATGATTATTTATCTTCTAGAAATATTTTTCTGTGCATGGTACACAGCTTTTAAATTTGTCCCAGGAGGTGTGTACGCTAGAGAAAGATCTGATGTGCTTTTGGGGACAGTGATGCTAATTATTGGGCTGAATATGCTATTTGGTCCCAAGAAAAGCCTTGATTTTCATCTTCAAACAAAAAACAGTCCTAAAATGCTTTTCAGAGAGATTTTGTGGCTGCTTGCACCAGCCACAGAGGTCTCTGCCGCCATCTGGCCTTTCAGGTTTGGCTTTGACAATGAAGGATGGTCTAATTTAGAAAGATCAGCTCAACTGCTCAAACAGAGCGACGCTTCTAAGCCCTATATTGGGAACAATGACCTGACCACGTGGTTAGGGGAGAAGCTGGGTTTCTATACCGACTTTGGTCCAAGCGCAAGGGATCACACTTGGGGGATTATGGTTTTGTCAAGATACCGGATTGTGAAATCAGAGCATCACCTTCTTCCGTCACCAGAGGGCGAGATTGCACCAGCCATCACTCTGACTGTTAACATTTCCGACAAACTGGTGGATTTTGTTGTGACCCACTTTGGGAATCACGAAGATGACCTCSATAGGAAACTTCAAGCTATTGCTGTTTCAAAACTACTGAAAAATAGCTCTGAGCAAGTGATATTTCTGGGATATATCACTTCAGCACCTGGTTCCAGAGATTATCTACAGCTCATTGAACGTGGCAATGTGAAGGATATTGACAGCACAGATCAAGACAGATGGTRTGAATACATTATGTATYGAGGGCTGATCAAATTGGGTTATGCAAGAATCTCCCATGCTGAGCTGAGTGACTCTGAAATTCAGATGGCCGAATTTAGGATCCCTGATGATCCCATTAATTATAGAGACAACCAGAAAGTGGCCACAGACCCCAGGGAAGTTCCYGAGAAAATTCACTTCAATCCCAGATTTGGATCTTACAAAGAAGGACATAATTTTGAGAACAATCATCATTTTCATATGAGTACTCCCAAATACTTTTTA

Related Sequences

bmy_10806T0 SequenceType object (3)

Length: 581 aa      View alignments
>bmy_10806T0
SIASFQAPNAKLRLVVLALGLSSSLVVQAVTWWTGSGLQRYFRIWGFILGQILLLVLRIWYTSLNPVWTYQMSKRVILTLSTIATLDRIYTDGACCRPEGKKSGEAARVMASRPNWLLAGAAFGSLMFLTHWIFGEVSVVSRWAVSGHPHPGPDPNPFGSAVLLGLASGLMLSPCSWFPGSSLTWWMTGATSAVGLLYLPTWAAALSGCVLALFTASMWPQVLGHLISSGSGPGKAMTTAMIIYLLEIFFCAWYTAFKFVPGGVYARERSDVLLGTVMLIIGLNMLFGPKKSLDFHLQTKNSPKMLFREILWLLAPATEVSAAIWPFRFGFDNEGWSNLERSAQLLKQSDASKPYIGNNDLTTWLGEKLGFYTDFGPSARDHTWGIMVLSRYRIVKSEHHLLPSPEGEIAPAITLTVNISDKLVDFVVTHFGNHEDDLXRKLQAIAVSKLLKNSSEQVIFLGYITSAPGSRDYLQLIERGNVKDIDSTDQDRWXEYIMYXGLIKLGYARISHAELSDSEIQMAEFRIPDDPINYRDNQKVATDPREVPEKIHFNPRFGSYKEGHNFENNHHFHMSTPKYFL