Part of scaffold_575 (SequenceType object (1))

For more information consult the page for scaffold_575 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SLC10A4ENSTTRG00000011259 (Bottlenosed dolphin)

Gene Details

solute carrier family 10 (sodium/bile acid cotransporter family), member 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010675, Bottlenosed dolphin)

Protein Percentage 71.27%
cDNA percentage 71.89%
Ka/Ks Ratio 0.38466 (Ka = 0.0173, Ks = 0.0449)

SLC10A4ENSBTAG00000004888 (Cow)

Gene Details

sodium/bile acid cotransporter 4

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000006428, Cow)

Protein Percentage 95.91%
cDNA percentage 93.56%
Ka/Ks Ratio 0.09964 (Ka = 0.0201, Ks = 0.2021)

SLC10A4 (Minke Whale)

Gene Details

solute carrier family 10, member 4

External Links

Gene match (Identifier: BACU008750, Minke Whale)

Protein Percentage 98.88%
cDNA percentage 98.76%
Ka/Ks Ratio 0.1916 (Ka = 0.0055, Ks = 0.029)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 810 bp    Location:596585..591609   Strand:-
>bmy_10811
ATGGCGGTGCTCCTATGTGGCTGCTGTCCCGGCGGGAATCTCTCCAACCTTATGTCCCTGCTGGTTGACGGCGACATGAACCTCAGCATCATCATGACCATCTCTTCCACGCTCCTGGCCCTGGTCTTGATGCCACTGTGCCTGTGGATCTACAGCCGGGCTTGGATCAACACTCCTCTGGTGCAATTACTGCCCATAGGCACAGTGATCCTGACTCTCTGCAGCACTCTCATCCCTATTGGTTTGGGTGTCTTCATTCGCTACAGATACAACCGGGTGGCTGACTACATTGTGAAGGTTTCCCTGTGGTCTCTGCTAATGACGCTGGTGGTCCTTTTCATAATGACCTGCACTATGTTAGGACCCAAACTGCTGGCAAGTATTCCTGCAGCTGTTTATGTGGTAGCGATTTTTATGCCTTTGGCAGGCTACGCCTCAGGCTATGGCTTAGCTACTCTCTTCCATCTTCCACCCAACTGCAAGAGGACTGTGTGCCTGGAAACAGGGAGCCAGAACGTGCAGCTCTGTACCGCCATTCTAAAACTGGCCTTTCCACCGCAAAACATAGGAAGTATGTACATGTTTCCCTTGCTTTATGCCCTTTTCCAGTCTGCAGAAGCAGGGATTTTTGTTTTAATTTATAAAATGTATGGGAGTGGAATATTGTACAAGCAAGATCCTCTAGATGAGGATGAAGATACAGATATTTCTTATAAGAAACTAAAAGAAGAGGAAATGGCAGACACTTCCTATGGCACAGTGAAAGCAGATAATTTAATTATGATGGAAACCACTCAGACTTCGCTCTAA

Related Sequences

bmy_10811T0 SequenceType object (3)

Length: 270 aa      View alignments
>bmy_10811T0
MAVLLCGCCPGGNLSNLMSLLVDGDMNLSIIMTISSTLLALVLMPLCLWIYSRAWINTPLVQLLPIGTVILTLCSTLIPIGLGVFIRYRYNRVADYIVKVSLWSLLMTLVVLFIMTCTMLGPKLLASIPAAVYVVAIFMPLAGYASGYGLATLFHLPPNCKRTVCLETGSQNVQLCTAILKLAFPPQNIGSMYMFPLLYALFQSAEAGIFVLIYKMYGSGILYKQDPLDEDEDTDISYKKLKEEEMADTSYGTVKADNLIMMETTQTSL*