Sequence detailsbmy_10816 (Coding sequence)

Part of scaffold_575 (SequenceType object (1))

For more information consult the page for scaffold_575 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NIPAL1ENSTTRG00000003277 (Bottlenosed dolphin)

Gene Details

NIPA-like domain containing 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003074, Bottlenosed dolphin)

Protein Percentage 98.05%
cDNA percentage 98.22%
Ka/Ks Ratio 0.22817 (Ka = 0.0094, Ks = 0.0411)

NIPAL1ENSBTAG00000009423 (Cow)

Gene Details

magnesium transporter NIPA3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012400, Cow)

Protein Percentage 92.23%
cDNA percentage 93.77%
Ka/Ks Ratio 0.36231 (Ka = 0.0439, Ks = 0.1211)

Additional orthologs identified in other species via the OPTIC pipeline.

NIPAL1 (Human)   Nipal1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1242 bp    Location:1027411..1004268   Strand:-
Raw sequence 
>bmy_10816
ATGGGGGGACAGGTGAGGCTGCCGCCCGGAGAGCCCTGCCGAGAAGGCTACGTGCTGTCTCTGATCTGTCCGAATGCCTCCCAGGCTTGGTGTGAGATCATACGTGTGTCACAGCTGCTGGCTTCTCCTGTCCTCTACAGGGACCTGAATTCCAGCATAACCAACTGGAGCATTTCTGCAAACGCAGAGAACAAATACAGTCTTTATGTAGGCCTGGTACTGGCAATAAGTTCCAGTATTTTTATTGGCTCCAGTTTCATCTTGAAAAAAAAGGGCCTCTTACAACTGGCCAACAAGGGCGTTACTAGAGCCGGACAAGGTGGATATTCTTACCTCAAGGAATGGCTCTGGTGGGCAGGATTACTCTCAATGGGAGCAGGCGAGGCTGCGAATTTTGCAGCTTATGCTTTTGCACCTGCCACCTTGGTCACCCCACTGGGCGCTCTGAGTGTTCTCATAAGTGCACTGTTGTCTTCCTATTTTTTAAATGAGCACTTGAACATTCATGGGAAAATAGGCTGCATATTAAGTATATTGGGGTCAACTGTGATGGTTATCCATGCCCCACAAGAAGAGGAAGTCGCTTCTCTGCATGAAATGGAAATGAAATTGAGAGACCCAGGATTTATCTCCTTTGCTGTGATCATAACTGTGATCTCCTTGGTGCTGATTTTGATTGTAGCTCCCAAGAAAGGACAGACCAATATATTGGTCTACATTTCAATCTGTTCATTGATTGGAGCATTTTCAGTTTCTTCTGTCAAGGGCCTGGGAATTGCCATTAAGGAACTACTGGAATGGAAGCCCATTTATAAGCATCCCCTGGTCTTTGTTTTGCTGGCTGTACTCGTGCTTTCAGTGACAACACAGATTAACTATCTCAACAAGGCACTGGACACCTTTAATACATCTCTTGTGACTCCCATTTATTATGTGTTCTTCACGTCCATGGTAGTAACTTGCTCTGCCATCTTATTCCAAGAATGGTATGGCATGAATGCTGGAGATATCATCGGGACTTTGAGTGGGTTCTTCACCATTATCAATGGCATCTTCCTTCTACATGCTTTTAAAAACACTGACATTACCTGGAGTGATCTGACATCCACTACTCAGAAAGAAGTCCTCTCTCTGAATGGCAATGAAGACAAATACGTCTTACTAGAGAATGTAGAATGTTCAGCCCCAGGATTTGATGATGACATTACCTTGTTTAGCAGGACTGATGATCAAAGTCCCTAG

Related Sequences

bmy_10816T0 SequenceType object (3)

Length: 414 aa      View alignments
>bmy_10816T0
MGGQVRLPPGEPCREGYVLSLICPNASQAWCEIIRVSQLLASPVLYRDLNSSITNWSISANAENKYSLYVGLVLAISSSIFIGSSFILKKKGLLQLANKGVTRAGQGGYSYLKEWLWWAGLLSMGAGEAANFAAYAFAPATLVTPLGALSVLISALLSSYFLNEHLNIHGKIGCILSILGSTVMVIHAPQEEEVASLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQTNILVYISICSLIGAFSVSSVKGLGIAIKELLEWKPIYKHPLVFVLLAVLVLSVTTQINYLNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMNAGDIIGTLSGFFTIINGIFLLHAFKNTDITWSDLTSTTQKEVLSLNGNEDKYVLLENVECSAPGFDDDITLFSRTDDQSP*