Part of scaffold_585 (Scaffold)

For more information consult the page for scaffold_585 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATL3 ENSTTRG00000013361 (Bottlenosed dolphin)

Gene Details

atlastin GTPase 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012677, Bottlenosed dolphin)

Protein Percentage 93.43%
cDNA percentage 94.46%
Ka/Ks Ratio 0.44606 (Ka = 0.0447, Ks = 0.1001)

ATL3 ENSBTAG00000003330 (Cow)

Gene Details

atlastin-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043475, Cow)

Protein Percentage 96.1%
cDNA percentage 94.05%
Ka/Ks Ratio 0.10881 (Ka = 0.0193, Ks = 0.1776)

ATL3  (Minke Whale)

Gene Details

atlastin GTPase 3

External Links

Gene match (Identifier: BACU005349, Minke Whale)

Protein Percentage 95.3%
cDNA percentage 96.15%
Ka/Ks Ratio 0.47823 (Ka = 0.0317, Ks = 0.0662)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1506 bp    Location:282448..240712   Strand:-
>bmy_10848
ATGGAGAGTGCCAAGCCTTGTCCAGTGCAGGTTGTTTTGGTTCAGAAAGACCAACATGCCTATGAGCTAGAAGAGAAAGCCTTGGCCAGCATCCTCTTACAGGAACACATCCGAGACCTTGATGTGGTGGTGGTGTCAGTGGCTGGTGCCTTCCGAAAGGGCAAGTCCTTCTTTCTGGACTTTATGCTACGATACTTATATTTCCAGAAGGAAGGTGGCCGTTCAAATTGGTTGGGTGACCCAGAAGAACCGTTAACAGGGTTTTCATGGAGAGGGGGCTCTGACCCAGAAACCACTGGGATTCAGATCTGGAGTGAGGTTTTCACTGTGGAGAAGCCAGATGGGAAGAAGGTTGCAGTTGTTCTGATGGATACCCAGGGGGCATTTGACAGCCAGTCCACTGTGAAAGATTGTGCTACCATCTTTGCTCTAAGTACCATGACTAGTTCTGTTCAGACWCTGATGTTTCTGGTTCGAGACTGGAGTTTCCCTTATGAATACAACTATGGACTACAGGGAGGAATGTCGTTTTTGGAAAAGCGTCTACAGGTGAAAGAACATCAACATGAAGAAATTCAGAATGTCCGAAATCACATTCACTCATGTTTCTCCAGTGTCACCTGTTTTCTGCTACCGCATCCAGGGCTCCAGGTCGCCACAAGCCCTGACTTTGATGGCAAATTGAAAGATGTTGCCAGTGAATTCAAAGAGCAGTTACAGACACTGATACCATATGTATTAAACCCAGCTAACTTAATGGAAAAGGAGATCAATGGCTCAAAAGTCACCTGTCGGGGGCTATTGGAATATTTTAAGGCGTATATTAAAATTTACCAAGGAGAAGATCTGCCTCACCCCAAATCCATGCTTCAGAACATGTCCGACGTATCTAAATATTTCCTGTTTACTAATCAGGCCACTGCTGAAGCCAACAATTTAGCAGCTGCAGCCTCTGCCAAGGACATTTACTATAACAACATGGAAGAGGTTTCTGGGGGAGACAAACCTTATTTGTCTCCAGACATTCTAGAGGAGAAGCACTGTGAATTCAAAGAACTTGCTCTGGACCATTTTAAGAAGACAAAAAAGATGGGTGGGAAGGATTTTAGCCTTCGTTACCAGCAGGAGCTGGAGGAGGAGATCAAGGAACTCTATGAGAACTTCTGCAAGCACAATGGTAGCAAGAATGTCTTCAGCACCTTCCGAACCCCTGCAGTGCTCTTCACAGGCATTGTGGCTTTGTACATAGCCTCAGGCCTCACTGGCTTTATTGGTCTTGAGGTGGTGGCCCAGCTGTTCAACTGTATGGTTGGACTGCTGTTAATAGCGCTTCTCACCTGGGGGTACATCAGGTACTCTGGTCAGTATCGTGAGCTGGGCGGTGCTATCGATTCTGGTGCAGCATATGTATTAGAGCAGGCCACTTCTCACGTTGGTAATTCCACTCAAGCTGCTGTGAGGGACGCAGTTGTTGGGAGACCATCCTCGGATAAAAAAGCTCAGTAG

Related Sequences

bmy_10848T0 Protein

Length: 502 aa      View alignments
>bmy_10848T0
MESAKPCPVQVVLVQKDQHAYELEEKALASILLQEHIRDLDVVVVSVAGAFRKGKSFFLDFMLRYLYFQKEGGRSNWLGDPEEPLTGFSWRGGSDPETTGIQIWSEVFTVEKPDGKKVAVVLMDTQGAFDSQSTVKDCATIFALSTMTSSVQTLMFLVRDWSFPYEYNYGLQGGMSFLEKRLQVKEHQHEEIQNVRNHIHSCFSSVTCFLLPHPGLQVATSPDFDGKLKDVASEFKEQLQTLIPYVLNPANLMEKEINGSKVTCRGLLEYFKAYIKIYQGEDLPHPKSMLQNMSDVSKYFLFTNQATAEANNLAAAASAKDIYYNNMEEVSGGDKPYLSPDILEEKHCEFKELALDHFKKTKKMGGKDFSLRYQQELEEEIKELYENFCKHNGSKNVFSTFRTPAVLFTGIVALYIASGLTGFIGLEVVAQLFNCMVGLLLIALLTWGYIRYSGQYRELGGAIDSGAAYVLEQATSHVGNSTQAAVRDAVVGRPSSDKKAQ*