Part of scaffold_585 (Scaffold)

For more information consult the page for scaffold_585 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC88B ENSTTRG00000010302 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 88B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009780, Bottlenosed dolphin)

Protein Percentage 86.15%
cDNA percentage 87.89%
Ka/Ks Ratio 0.33417 (Ka = 0.0311, Ks = 0.0929)

CCDC88B ENSBTAG00000040190 (Cow)

Gene Details

coiled-coil domain-containing protein 88B precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000051339, Cow)

Protein Percentage 87.1%
cDNA percentage 88.95%
Ka/Ks Ratio 0.18258 (Ka = 0.067, Ks = 0.3668)

CCDC88B  (Minke Whale)

Gene Details

coiled-coil domain containing 88B

External Links

Gene match (Identifier: BACU005331, Minke Whale)

Protein Percentage 95.57%
cDNA percentage 96.78%
Ka/Ks Ratio 0.30847 (Ka = 0.0222, Ks = 0.0719)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3543 bp    Location:852287..866780   Strand:+
>bmy_10877
ATGGATGGGGGCAAGGGGCCCAGGATCAGAGACTTCCTGAGTGGGAGCCTGGCCACCTGGGCGCTGGGACTGGCCGGGCTGGTGGGGGAGGCGGAGGAGCCAGAGGGGGAAGAGGAGGAGGAAGGAGAGGGGCCTCTTTGTCCGGAGAAGAGGTTCTCACGTCTCAGCGACGGGGCCCTGCTCCTCCGGGTGCTGGGCATCATTGCCCCCAATTCCCGAGGCTGCCCTCGAATGATCAGGGGCCACGATGGTCCCGCAGCCTGGCGGGTGTGGAACCTGAACCACCTGTGGGGCCGACTGAGGGACTTCTACCAGGTGAGGGGTCAGGAGGGGGAGGCTGAGCCTGGGACCCCCCCTGTGGGAAGGCCCTTCTCACATCTCCCACCCCGTCCGCCCCAGGAGGAGCTGCAGTTGCTGATCCTGTCTCCACCCCCAGACCTCCAGGCGCTGGGGTGCTCTCTCCCACCACCCCTTCCTGCTTCTTCCCCCTATCCCTGCCCGTTAACCCCTTGTGGCTTGTGCCCTGCAGAGGAGGCGGTGGAGGAGCTGGAAGGCATCCTTAGGCTATTGCTGGGGGCATCGGTGCAGTGTGAGCACCGGGAACTGTTCATCCGGCACATCCAGGGCCTCAGCCTCGACGTCCAGAGTGAGCTGGCTGCCGCCATCCAGGAGGTACAACTTTGGTCGGCCGTCTGGGACACCCTGCCCCCTACTTCTTTGGCTGACCTGCTCTCCCTGTGCCTCCAGGTGACCCAGCCCGGGGCCGGCTTGGTGCTGCCGCTGGCTGGGCCTGAGCCTGGGGAGCTGGCGCCTCCGGAGCTGGAGATGCTGTCCCGGAGCCTGGTGGGGACACTGTTGAGGCTGGCTCGGGAGCGGGACGTGGGGGCCCAGCGGCTGGCTGAATTGCTGCTGGAGCGGCAGCCAGCGGCCCCCTTGTTGCCTGAGGCTCCTGCCAGGACTCCCCCGGAGGGCGCCTCACACCACCTGGCCCTGCAGCTGGCCAACACCAAGGCCCAACTGCGGCGTGTCCGGCAGGAGCTGGAGGAGAAAGCTGAGCTGCTGCTAGATTCCCAGGTGGAGGTGCAGGGCTTGGAGGCCGAAATTCGAAGGCTCCGCCAGGAGGCCCAGGCGCTGTCGGGACAGGCCAAACGGGCCGAGCTGTACCGCGAGGAGGCGGAGGCGCTGCGGGAGCGGGCCGGCCGCCTGCCCCGCCTGCAGGAGGAACTGCGACGCTGCCGGGAGCGGCTGCAGGCAGCAGAGGCCTGCAAGGGCCAGCTGGAGGAGGAGCGGGTGCTCTCGGGGGCTCTGGAAGCCTCGAAGGCGCTGCTGGAGGAGCAGCTGGAGGCCGCTCAGGAGCGCTGTGCTCGGCTGCATGAGACCCAGCGGGAGAACCTGCTGCTGCGGACCCGGCTGGGCGAGGCCCATGCGGAGCTGGACTCTCTGCGGCATCAGGTGGACCAGCTGGCAGAGGAGAACGTGGAGCTGGAGTTGGAGGTTCAGCGGAGCCTGGAGCCAGCCCCGGGCTCTCCTGGGGAGGCGCCCCTGCCAGGAGCGGCTCTCTCTCTGCAGGACGAAGTGAGGGAGGCAGAGGCTGGGCGGCTGCGGACCCTGGAGCGGGAGAATCAGGAGCTTCGAGGCCTGCTCCGGGTGCTGCAGGGGCAGCCAGGTGGCCAGCCCCCCCTGCTGGAGGAGCCGAGCGAGGACTCCGTGATTCCAGAGCCAGRCTCAGCTCCCCAGACTCGGCTGGCCTCAGACCATGGCCCCCAGGGCTTGGCTGGTCAGGCAGGGGATGAAGGCCCCCAGGCTTTGGACCCGGCTCCCCTGGCGTCAGATTCAGCCCTCGAGGGGTTAGCTGAGTGTCCTCAGGCATCTGATTTGGACCCAAAGGTGGTGGAGAGGCCCCTCCAGGCGGCTGTCATGGTGCCTGTAGACACGATGGYCCAGGAGTCAGGCCCYGCTGTAGAGGCGCAGGAGTCCCTGAAGAAGGCTGGCCTTGGAGCCCCTCTCCAGACCCCTGCCTCTGTGGCCCCACCTCAGGGTCCAGAGATCAAAATTCAGGCCCAGCTGTCGCTGGGAGGAGAGACTGGAGAGTTGGTGCCCAAGGCCTTGGGGCTGAGACAGGAGGACCCTGAGAGCAAACCCGGACTCTCGGAGCCCAGCCTCTGTGGGCAGTTGGAGGAGCAGGAGACCCTAGACCAGAGGCTGGACCTACCCAAGGGGCAAGCAGAGGCCAGAGAGCATGAACAGAAGTTGGAGAGGATGGTYGGGGACCCAGCCCAACAAAAACCACAGCAGAAGCTGGAAGGGGCTCCTGAGGCCCAGACCTGGGAGGGGAGGATCCCAGGGGAGATCCTGGCCAGTGCACTGCCACCAGTGGACCCACCTCCATTGCTGTGCCCTCTTGTGTGGCTGGGCTCTCTACACTTCCGGGGCGGGCTCACCCTGGGGCTCATCGGTGGTCGGGAGCGGCACGAGCAGCTGCAGGCCCAGAGGGCCCATGTGGAGGCGCAGGAGGTGGCCCTGCTGGCAGAGCGCGAACGCCTGATGCAGGACGGGCATCGGCAGCGGGGCCTGGAGGAGGAGCTGCGGAGGCTGCAGAGTGAGCATGACAGAGCTCAGATGCTGCTGGCGGAGGTGTCCCGGGAGCGAGGTGAGCTGCAGGGGGAACGCGGGGAGCTGCGGGGCCGGCTGGCGAGGCTGGAGCTGGAGCGGGCACAGCTGGAGGCGCAGAGCCTGCGACTGCGAGAGTCCAACCAGCAGCTGGACCTGAGCGCCTGCCGGCTGGCCACACAGTGTGAGCTGTTGACGGAGCTCCGGAGCGCCCAGGAAGAGGAGAACCGGCAGCTGCTGGCCGAGGTGCAGGCTCTGAGCCGGGAGAACCGGGAGCTCCTGGAGCGCAGCCTGGAGAGCCGGGACCACCTGCACCGCGAGCAGCGCGAGTACCTGGACCAGCTCAATGCCCTGCGCCGGGAGAAGCAGAAGCTGGTGGAGAAAATCATGGACCAGTACCGCGTGCTGGAGCCTGGGCCCCTGCCCCGGACCAAGAAGGGCAGCTGGCTGGCAGACAAGGTGAAGAGGCTGATGCGGCCCCGGCGGGAGGGGGGCCCCCATGGGGGGCCGCGCCTGGGGGCCGATGGGGCTGGCAGCACCGAGAGCCTAGGGGGCCCCCCAGAGACGGAGCTCTCCGAGGGCAGGGAGGCAGATGGGACAGGGTCCCCCTCACCGGCACCCATGCGCCGGGCCCAGAGCTCCCTGTGCCTGCGGGATGAGACTCTGGCAGGTGGGCAGCGGCGGAAACTCAGCTCGAGATTCCCCGTGGGGAGAAGCTCTGAGTCATTCAGCCCCGGGGACACCCCGCGGCAGAGATTCCGACAGAGGCGCCCAGGCCCGCTGGGGGCACCCAGCTCCCATGGCAAAGGACCTGGCGTGGGATGGGATGGCTCTGTCGAGACCCTGGCGGAACGTGAAGCAGATGCCAACAGAGAGGGCGTCGAGGTGCAGGAATCGGAGAAACGGGCTCTCGCCCCTTCCCTCAGCCAGTGA

Related Sequences

bmy_10877T0 Protein

Length: 1181 aa      View alignments
>bmy_10877T0
MDGGKGPRIRDFLSGSLATWALGLAGLVGEAEEPEGEEEEEGEGPLCPEKRFSRLSDGALLLRVLGIIAPNSRGCPRMIRGHDGPAAWRVWNLNHLWGRLRDFYQVRGQEGEAEPGTPPVGRPFSHLPPRPPQEELQLLILSPPPDLQALGCSLPPPLPASSPYPCPLTPCGLCPAEEAVEELEGILRLLLGASVQCEHRELFIRHIQGLSLDVQSELAAAIQEVQLWSAVWDTLPPTSLADLLSLCLQVTQPGAGLVLPLAGPEPGELAPPELEMLSRSLVGTLLRLARERDVGAQRLAELLLERQPAAPLLPEAPARTPPEGASHHLALQLANTKAQLRRVRQELEEKAELLLDSQVEVQGLEAEIRRLRQEAQALSGQAKRAELYREEAEALRERAGRLPRLQEELRRCRERLQAAEACKGQLEEERVLSGALEASKALLEEQLEAAQERCARLHETQRENLLLRTRLGEAHAELDSLRHQVDQLAEENVELELEVQRSLEPAPGSPGEAPLPGAALSLQDEVREAEAGRLRTLERENQELRGLLRVLQGQPGGQPPLLEEPSEDSVIPEPXSAPQTRLASDHGPQGLAGQAGDEGPQALDPAPLASDSALEGLAECPQASDLDPKVVERPLQAAVMVPVDTMXQESGPAVEAQESLKKAGLGAPLQTPASVAPPQGPEIKIQAQLSLGGETGELVPKALGLRQEDPESKPGLSEPSLCGQLEEQETLDQRLDLPKGQAEAREHEQKLERMVGDPAQQKPQQKLEGAPEAQTWEGRIPGEILASALPPVDPPPLLCPLVWLGSLHFRGGLTLGLIGGRERHEQLQAQRAHVEAQEVALLAERERLMQDGHRQRGLEEELRRLQSEHDRAQMLLAEVSRERGELQGERGELRGRLARLELERAQLEAQSLRLRESNQQLDLSACRLATQCELLTELRSAQEEENRQLLAEVQALSRENRELLERSLESRDHLHREQREYLDQLNALRREKQKLVEKIMDQYRVLEPGPLPRTKKGSWLADKVKRLMRPRREGGPHGGPRLGADGAGSTESLGGPPETELSEGREADGTGSPSPAPMRRAQSSLCLRDETLAGGQRRKLSSRFPVGRSSESFSPGDTPRQRFRQRRPGPLGAPSSHGKGPGVGWDGSVETLAEREADANREGVEVQESEKRALAPSLSQ*