Part of scaffold_574 (Scaffold)

For more information consult the page for scaffold_574 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NR2E1 ENSTTRG00000008863 (Bottlenosed dolphin)

Gene Details

nuclear receptor subfamily 2, group E, member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008401, Bottlenosed dolphin)

Protein Percentage 97.89%
cDNA percentage 97.48%
Ka/Ks Ratio 0.31802 (Ka = 0.0159, Ks = 0.05)

NR2E1 ENSBTAG00000013991 (Cow)

Gene Details

nuclear receptor subfamily 2 group E member 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018594, Cow)

Protein Percentage 99.7%
cDNA percentage 97.09%
Ka/Ks Ratio 0.01257 (Ka = 0.0014, Ks = 0.1107)

NR2E1  (Minke Whale)

Gene Details

nuclear receptor subfamily 2, group E, member 1

External Links

Gene match (Identifier: BACU014192, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.33%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0178)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 999 bp    Location:303570..282531   Strand:-
>bmy_10884
ATGAGCAAGCCGGCCGGATCAACAAGCCGTATTTTAGATATCCCCTGTAAAGTGTGTGGCGACCGCAGCTCGGGGAAACACTATGGGGTCTACGCCTGCGACGGCTGCTCGGGGTTTTTCAAACGAAGTATCCGAAGGAATAGGACGTATGTCTGCAAATCTGGAAACCAGGGAGGCTGCCCGGTGGACAAGACACACAGAAACCAGTGCAGGGCGTGTCGGCTGAAGAAGTGTTTGGAAGTCAACATGAACAAAGATGCCGTGCAGCATGAGCGGGGCCCTCGGACGTCCACCATCCGCAAGCAGGTGGCCCTATACTTCCGTGGACACAAGGAAGAGAACGGGGCGGCCGCGCACTTCCCCTCCGCAGCACTACCCGCGCCGGCATTCTTCACCGCGGTTACGCAGCTGGAGCCCCACGGCCTGGAGCTGGCCGCCGTGTCCGCCACTCCYGAGCGGCAGACCCTCGTGAGCCTGGCTCAGCCCACGCCCAAGTACCCCCATGAAGTGAATGGGACCCCAATGTATCTCTATGAAGTGGCCACAGAGTCAGTGTGTGAATCAGCTGCCAGACTTCTATTTATGAGCATCAAGTGGGCTAAGAGTGTGCCAGCTTTCTCCACGCTATCTTTGCAAGACCAGCTGATGCTTTTGGAAGATGCTTGGAGAGAACTGTTTGTTCTAGGAATAGCACAATGGGCCATTCCGGTTGATGCTAACACTCTACTGGCTGTATCTGGCATGAATGGTGACAACACAGATTCCCAGAAGCTGAACAAGATCATATCTGAAATACAGGCTTTACAAGAGGTGGTGGCTCGGTTTAGACAACTCCGGTTAGATGCTACTGAATTTGCCTGTCTAAAATGCATCGTCACTTTCAAAGCTGTTCCTACACACAGTGGTTCTGAACTGAGAAGTTTCCGGAATGCTGCCGCCATCGCAGCTCTTCAAGATGAGGCTCAGCTAACTCTCAACAGCTACATCCATACCAGGTGA

Related Sequences

bmy_10884T0 Protein

Length: 333 aa      View alignments
>bmy_10884T0
MSKPAGSTSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAVTQLEPHGLELAAVSATPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTDSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTR*