Part of scaffold_580 (Scaffold)

For more information consult the page for scaffold_580 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GRAMD1B ENSTTRG00000011147 (Bottlenosed dolphin)

Gene Details

GRAM domain containing 1B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010568, Bottlenosed dolphin)

Protein Percentage 74.3%
cDNA percentage 73.95%
Ka/Ks Ratio 0.15292 (Ka = 0.0259, Ks = 0.1695)

GRAMD1B ENSBTAG00000001410 (Cow)

Gene Details

GRAM domain-containing protein 1B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001849, Cow)

Protein Percentage 94.98%
cDNA percentage 91.73%
Ka/Ks Ratio 0.0752 (Ka = 0.0305, Ks = 0.4055)

GRAMD1B  (Minke Whale)

Gene Details

GRAM domain containing 1B

External Links

Gene match (Identifier: BACU017374, Minke Whale)

Protein Percentage 95.57%
cDNA percentage 95.96%
Ka/Ks Ratio 0.25106 (Ka = 0.028, Ks = 0.1117)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2064 bp    Location:98966..69594   Strand:-
>bmy_10897
ACGCAAGCAGGTGCTCCTCGCGCACCTTCCTCCCCAACCCGCGAACCTGGGAACATCCTGCTAACCTTGGCCATTGTCACGCAGGTGTTAAGCCCCACTTACAAGCAGAGAAATGAAGACTTCAGAAAGCTCTTTAAGCAACTTCCAGACACGGAGCGCCTCATCGTTGATTACTCCTGCGCACTCCAAAGAGACATTCTTCTTCAGGGCCGACTCTACCTCTCTGAAAACTGGATCTGCTTCTACAGCAACATCTTCCGCTGGGAAACTCTGCTGACCGTTCGTTTGAAAGACATCTGCTCCATGACTAAAGAAAAAACAGCCCGCCTCATTCCCAATGCCATCCAAGTTTGCACTGACTCGGAAAAGCACTTTTTCACTTCCTTTGGGGCCCGGGATAGGACGTACATGATGATGTTCCGCCTCTGGCAGAACGCTCTCCTGGAAAAGCCCCTGTGCCCCAAGGAGCTCTGGCACTTCGTTCACCAGTGCTACGGGAATGAGCTGGGCCTGACCAGCGATGACGAGGACTACGTGCCCCCTGATGATGACTTCAACACGATGGGCTAYTGTGAGGAGATCCCTGTAGAGGAGAATGAAGTGAATGACAGCTCTTCCAAAAGCAGCATAGAGACCAGGCCGGATGCCAGCCCACAGCTGCCCAAGAAGTCCATCACCAACAGCACACTGACGTCCACGGGGAGCAGCGAAGCGCCCGTCTCGTTTGACGGCCTGCCCCTGGAGGAGGAGGTGCTGGAGGGCGACGGGTCCCTGGAGAAGGAGCTCGCCATCGACAGCATCATCGGGGAGAAGATTGAGATCATCGCGCCCGTGAACTCCCCTTCGCTAGACTTCAACGACAACGAGGACATCCCCACCGAGCTCAGTGACTCTTCCGACACCCACGATGAAGGGGAGGTCCAGGCCTTCTACGAGGACCTGAGTGGCCGGCAGTACGTGAACGAAGTCTTCAACTTCAGCGTGGACAAGCTGTACGACCTCCTGTTCACCGACTCGCCCTTCCAGCGGGACTTCATGGAGCAACGACGCTTCTCAGATATCATCTTCCACCCGTGGAAGAAGGAAGACAATGGAAACCAGAGCCGAGTGATTCTTTACACCATCACCCTTACCAACCCTCTGGCTCCCAAAACTGCCACTGTCAGGGAGACACAGCCTCGTCCCACGACACTTTCCTCCCCACAGACCATGTACAAGGCGAGCCAGGAGAGCGAGTGCTACGTGGTCGACGCCGAGGTCCTCACGCACGACGTGCCGTATCACGACTACTTCTACACCATCAACCGCTACACTCTCACCCGCGTGGCCCGGAACAAGAGTCGACTCAGGGTCTCCACAGAGCTGCGCTATCGAAAACAGCCCTGGGGGCTGGTGAAAACGTTCATCGAGAAGAACTTCTGGAGTGGGCTGGAGGACTACTTCCGCCACTTGGAGAGCGAGCTGACCAAAACGGAGAGCACCTACCTGGCTGAGCTGCACAGACAGTCTCCCAAGGAGAAGGCCRGTAAGCCCCCGTCGGTRCGGAGGAGGAAACGTCCCCATGCCCACCTGCGGGTGCCCCACCTGGAGGAGGCGATGAGCCCCGTGACCACGCCCACCGATGAAGATGTGGGCCACAGGATCAAGCACGTGGCAGGTTCCACGCAGACACGGCACATCCCTGAGGACGGCCCCAATGGTTTCCACCTGCAGAGTGTGTCCAAGCTGCTGCTGGTTATCAGCTGTGTTCTGGTGCTGCTGGTCATCCTCAACATGATGCTCTTCTACAAGCTCTGGATGTTGGAATATACCACCCAGACCCTCACTGCCTGGCAGGGTCTGAGGCTCCAGGAAAGGTTACCCCAGTCTCAGACAGAGTGGGCCCAGCTCTTAGAGTCCCAGCAAAAGTACCACGATACCGAGCTCCAAAAATGGAGGGAGATCATCAAATCCTCGGTGATGCTTCTTGACCAGATGAAGGACTCACTCATCAATCTTCAGAACGGCATCAGGGCCCGTGACTACACGTCAGAAAGTGAAGAGAAGAGGAACCGCTATCACTGA

Related Sequences

bmy_10897T0 Protein

Length: 688 aa      View alignments
>bmy_10897T0
TQAGAPRAPSSPTREPGNILLTLAIVTQVLSPTYKQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALLEKPLCPKELWHFVHQCYGNELGLTSDDEDYVPPDDDFNTMGYCEEIPVEENEVNDSSSKSSIETRPDASPQLPKKSITNSTLTSTGSSEAPVSFDGLPLEEEVLEGDGSLEKELAIDSIIGEKIEIIAPVNSPSLDFNDNEDIPTELSDSSDTHDEGEVQAFYEDLSGRQYVNEVFNFSVDKLYDLLFTDSPFQRDFMEQRRFSDIIFHPWKKEDNGNQSRVILYTITLTNPLAPKTATVRETQPRPTTLSSPQTMYKASQESECYVVDAEVLTHDVPYHDYFYTINRYTLTRVARNKSRLRVSTELRYRKQPWGLVKTFIEKNFWSGLEDYFRHLESELTKTESTYLAELHRQSPKEKAXKPPSVRRRKRPHAHLRVPHLEEAMSPVTTPTDEDVGHRIKHVAGSTQTRHIPEDGPNGFHLQSVSKLLLVISCVLVLLVILNMMLFYKLWMLEYTTQTLTAWQGLRLQERLPQSQTEWAQLLESQQKYHDTELQKWREIIKSSVMLLDQMKDSLINLQNGIRARDYTSESEEKRNRYH*