Part of scaffold_580 (Scaffold)

For more information consult the page for scaffold_580 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CRTAM ENSTTRG00000005724 (Bottlenosed dolphin)

Gene Details

cytotoxic and regulatory T cell molecule

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005406, Bottlenosed dolphin)

Protein Percentage 87.83%
cDNA percentage 89.58%
Ka/Ks Ratio 0.39376 (Ka = 0.065, Ks = 0.165)

CRTAM ENSBTAG00000005193 (Cow)

Gene Details

cytotoxic and regulatory T-cell molecule precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006846, Cow)

Protein Percentage 86.18%
cDNA percentage 90.46%
Ka/Ks Ratio 0.39862 (Ka = 0.074, Ks = 0.1856)

CRTAM  (Minke Whale)

Gene Details

cytotoxic and regulatory T cell molecule

External Links

Gene match (Identifier: BACU017366, Minke Whale)

Protein Percentage 97.38%
cDNA percentage 97.6%
Ka/Ks Ratio 0.26995 (Ka = 0.0131, Ks = 0.0484)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 915 bp    Location:740950..724968   Strand:-
>bmy_10904
GCCTTTCGGACCAACCACACGGAAACCGTCACCGTGGAGGAAGGCCAGACACTCACTCTAAAGTGTGTCATTTCTCAGGCGGAGACCACCTCCCTGCAGTGGCTGGCCCCATCCGGCTTCACCATTTTCTTCAGTGAGCATCCCGCTTTAAAAAATTCCAAATACCAGCTTCTTCATTACTCCTCCAATCAGCTCGCCATCAGGGTGCTGAATGTAACACAGCAAGACGAAGGCGTGTACAAGTGYCTGCATTACGGCACCTCCGTGAGAACAAAGGAAGTGAAAGTGATCGTGTTAGCAACTCCTGTCACGCCAACCTTAGAAGTTTCCGTTAGAATGCAAAATGGCGAAGAACATGTCATACTGAAATGCTCCACCGTGAGAAGTAGGCCCCCTCCACGGATAACCTGGCTCTTAGGGGATGACATGGAGCTCCAAGGTGAAACCCACCATGAATATGAAACTGATGGGAAGAAGTGTAATAGCACCAGCACACTCAGAGTTCACACATATGGCCAAAACTCAACAGCGAGCTGCATTATCCGACACAAAGGCCTGCAAGGAAGAAAACTGGTAGCACCTTTCCGGTTTGAAGATTTGGTTACTGATCAAGAGACAGCTTCAGCTGCCCTGGAGACAAGCTCTCCATCCTCTCAAGACCCTCAGCAGTCCACTAGTACCGAAGCGAATCGCCAGTTTGTGGGACTGACGAGGAAGAAGAGCGGCATCCTGCTGCTGACCCTCGTGTCCTTCCTCATTTTCATTCTCTTCATCATCGTCCAACTCTTCATCATGAAACTTCGGAAAGCACACGTCATATGGAAAAAAGAAAATGAAATTTCAGAGCACACTCTAGAAAGTTACAGATCGAGGTCAAATAATGAAGAAACATCATCCCAAGAGAAAAACAGCCAA

Related Sequences

bmy_10904T0 Protein

Length: 305 aa      View alignments
>bmy_10904T0
AFRTNHTETVTVEEGQTLTLKCVISQAETTSLQWLAPSGFTIFFSEHPALKNSKYQLLHYSSNQLAIRVLNVTQQDEGVYKCLHYGTSVRTKEVKVIVLATPVTPTLEVSVRMQNGEEHVILKCSTVRSRPPPRITWLLGDDMELQGETHHEYETDGKKCNSTSTLRVHTYGQNSTASCIIRHKGLQGRKLVAPFRFEDLVTDQETASAALETSSPSSQDPQQSTSTEANRQFVGLTRKKSGILLLTLVSFLIFILFIIVQLFIMKLRKAHVIWKKENEISEHTLESYRSRSNNEETSSQEKNSQ