Part of scaffold_580 (Scaffold)

For more information consult the page for scaffold_580 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBASH3B ENSTTRG00000005723 (Bottlenosed dolphin)

Gene Details

ubiquitin associated and SH3 domain containing B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005405, Bottlenosed dolphin)

Protein Percentage 97.07%
cDNA percentage 96.95%
Ka/Ks Ratio 0.23709 (Ka = 0.0186, Ks = 0.0786)

UBASH3B ENSBTAG00000000842 (Cow)

Gene Details

ubiquitin-associated and SH3 domain-containing protein B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001118, Cow)

Protein Percentage 96.9%
cDNA percentage 92.76%
Ka/Ks Ratio 0.06787 (Ka = 0.0209, Ks = 0.308)

UBASH3B  (Minke Whale)

Gene Details

ubiquitin associated and SH3 domain containing B

External Links

Gene match (Identifier: BACU017365, Minke Whale)

Protein Percentage 96.9%
cDNA percentage 96.95%
Ka/Ks Ratio 0.3099 (Ka = 0.0213, Ks = 0.0687)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1743 bp    Location:792373..758988   Strand:-
>bmy_10905
ATGGACCTTGATGTCAGTTCTCCCTTTGCGTCCATGGTTCTCAAGTTGTTCTCCCACGTCGGCGACCCCTTCCTGGACGACCCCCTGCCCCGGGAGTACGTCCTCTACCTCCGCCCCACCGGCCCCTTAGCGCAGAAGCTTTCCGACTTCTGGCAGCAGTCAAAGCAGATCTGCGGCAAGAACAAGGCGCACAACATCTTCCCTCACATCACCCTCTGCCAGTTCTTCATGTGTGAGGACAGCAAGGTGGACGCCCTGGGGGAAGCCCTGCAGACCACCGTCAGTCGCTGGAAATGTAAGTTCTCAGCCCCGCTGCCCCTGGAGCTCTATACCTCCTCCAACTTCATCGGCCTCTTCGTGAAGGAAGACAGCGCAGAGGTCCTCAAGAAGTTTGCCGCCGACTTTGCTGCGGAGGCTGCCTCCAAAACCGAAGTGCACGTGGAGCCTCATAAGAAGCAGCTGCACGTGACCCTGGCTTACCACTTCCAAGCCAGCCACCTGCCCACCCTAGAGAAACTCGCCCAGAACATTGATGTCAAACTCGGGTGCGACTGGGTGGCTACCATATTCTCCCGGGATATCCGATTTGCTAACCACGAGACGTTACAGGTGATCTACCCCTACACCCCGCAGAACGACGATGAGCTGGAGCTGGTCCCTGGGGACTTCATCTTCATGTCGCCCATGGAGCAGACCAGCACCAGCGAGGGCTGGATCTACGGCACGTCCCTAACCACAGGCTGCTCCGGACTCCTGCCTGAGAACTACATCACCAAGGCTGACGAGTGCAGCACCTGGATATTTCATGGTTCTTACTCGATCTTAAATACATCATCTTCCAATGCGCTCTCATTTGGGGATGGCATCCTGGAGAGGCGGCAGTATGACGACCAGGGCCTGGGGGACACGACGCCCCTGACCATCATCTGCCAGCCCACCCAGAGATGCCTCTTTGTGTGTCGGCACGGTGAGAGGATGGATGTAGTTTTTGGGAAGTACTGGCTCTCCCAGTGCTTCGACGCCAAAGGTCGCTACATACGCACTAACCTGAACATGCCTCATAGCTTACCTCAGCGGAGCGGTGGTTTCCGAGATTACGAGAAAGATGCTCCAATCACCGTGTTTGGATGTATGCAAGCAAGACTCGTGGGTGAAGCCTTATTAGAGAGTAACACCATCATTGACCATGTCTATTGCTCCCCGTCCCTGCGCTGTGTCCAGACTGCGTACAACATCTTGAAAGGTTTACAACAAGAAAATCACTTGAAGATCCGCGTAGAGCCTGGTTTATTTGAGTGGACAAAATGGGTTGCTGGGAACACATTACCTGCGTGGATACCTCCATCAGAGTTAGCTGCAGCCAACCTGAGTGTTGATACAACCTACAGACCTCACATTCCAGTCAGCAAATTAGTGGTTTCAGAATCCTATGACACCTATATCAGTAGAAGTTTCCAAGTAACAAAGGAAATAATAAGTGAATGTAAAAGTAAAGGAAATAACATCCTGATTGTGGCCCACGCATCTTCCCTTGAAGCATGTACCTGCCAACTTCAGGGCCTGTCACCTCAGAACTCCAAGGACTTTGTACAAATGGTCCGAAAGATCCCCTACTTGGGGTTTTGTTCCTGTGAAGAATTAGGAGAAACTGGAATCTGGCAGCTGACAGACCCACCAATCCTCCCTCTTACCCATGGACCGACTGGGGGCTTCAACTGGAGAGAGACCCTGCTGCAAGAATAA

Related Sequences

bmy_10905T0 Protein

Length: 581 aa      View alignments
>bmy_10905T0
MDLDVSSPFASMVLKLFSHVGDPFLDDPLPREYVLYLRPTGPLAQKLSDFWQQSKQICGKNKAHNIFPHITLCQFFMCEDSKVDALGEALQTTVSRWKCKFSAPLPLELYTSSNFIGLFVKEDSAEVLKKFAADFAAEAASKTEVHVEPHKKQLHVTLAYHFQASHLPTLEKLAQNIDVKLGCDWVATIFSRDIRFANHETLQVIYPYTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADECSTWIFHGSYSILNTSSSNALSFGDGILERRQYDDQGLGDTTPLTIICQPTQRCLFVCRHGERMDVVFGKYWLSQCFDAKGRYIRTNLNMPHSLPQRSGGFRDYEKDAPITVFGCMQARLVGEALLESNTIIDHVYCSPSLRCVQTAYNILKGLQQENHLKIRVEPGLFEWTKWVAGNTLPAWIPPSELAAANLSVDTTYRPHIPVSKLVVSESYDTYISRSFQVTKEIISECKSKGNNILIVAHASSLEACTCQLQGLSPQNSKDFVQMVRKIPYLGFCSCEELGETGIWQLTDPPILPLTHGPTGGFNWRETLLQE*