Part of scaffold_582 (Scaffold)

For more information consult the page for scaffold_582 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MFAP1 ENSTTRG00000003728 (Bottlenosed dolphin)

Gene Details

microfibrillar-associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003501, Bottlenosed dolphin)

Protein Percentage 99.54%
cDNA percentage 98.78%
Ka/Ks Ratio 0.07278 (Ka = 0.0023, Ks = 0.0321)

MFAP1 ENSBTAG00000017213 (Cow)

Gene Details

Microfibrillar-associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022877, Cow)

Protein Percentage 99.32%
cDNA percentage 96.28%
Ka/Ks Ratio 0.01886 (Ka = 0.003, Ks = 0.1602)

MFAP1  (Minke Whale)

Gene Details

microfibrillar-associated protein 1

External Links

Gene match (Identifier: BACU016950, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.54%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0209)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1320 bp    Location:161101..174008   Strand:+
>bmy_10919
ATGTCGGTCCCAAGCTCACTCATGAAACAACCGCCCATTCAGTCTACGGCTGGGGCCGTCCCGGTTCGCAATGAGAAAGGTGAGATTTCGATGGAAAAAGTGAAGGTAAAACGTTATGTGTCGGGAAAGAGGCCAGACTATGCCCCTATGGAGTCCTCAGATGAGGAGGATGAAGAGTTTCAGTTCATTAAGAAAGCCAAAGAACAAGAAGCAGAGCCTGAGGAACAGGAGGAGGATTCATCTAGCGACCCTCGGCTACGGCGTTTGCAGAACCGTATTAGTGAAGATGTGGAGGAGAGATTGGCTCGACATCGGAAAATAGTGGAACCTGAAGTGGTTGGAGAAAGTGACTCCGAAGTGGAAGGAGATGCTTGGCGCATGGAACGAGAAGATAGCAGTGAAGAAGAAGAGGAAGAGATTGATGATGAGGAAATAGAACGGCGCCGTGGCATGATGCGTCAACGAGCGCAGGAGAGAAAAAATGAAGAGTTGGAAGTCATGGAGGTGGAAGATGAGGGACGTTCTGGGGAGGAGTCAGAATCAGAGTCTGAGTATGAAGAGTACACAGACAGTGAAGATGAGATGGAGCCTCGCCTTAAGCCAGTTTTCATTCGGAAGAAGGACCGGGTAACAGTTCAGGAACGTGAGGCTGAAGCATTGAAACAGAAGGAGCTGGAGCAGGAGGCGAAACGCATGGCTGAGGAGAGGCGCAAGTACACACTCAAGATTGTAGAAGAGGAGACCAAGAAAGAGCTGGAGGAGAACAAGCGGTCCCTGGCTGCACTGGATGCACTCAACACTGACGATGAAAATGATGAGGAGGAATATGAGGCGTGGAAAGTTCGGGAGCTGAAGAGAATCAAGAGGGACAGAGAAGATCGAGAAGCGCTTGAAAAGGAGAAAGCAGAAATTGAACGCATGCGAAACCTGACTGAGGAAGAGAGGCGAGCTGAGCTTCGGGCAAATGGCAAAGTCATTACCAACAAAGCTGTTAAGGGCAAATATAAGTTYTTACAGAAGTATTATCACCGGGGTGCCTTCTTCATGGATGAGGATGAAGAAGTATACAAGAGAGATTTCAGCGCACCTACCCTGGAGGATCATTTCAACAAAACCATTCTTCCCAAAGTCATGCAGGTCAAGAACTTTGGACGCTCTGGTCGTACCAAATACACCCACCTCGTGGATCAAGACACCACCTCCTTTGACTCAGCATGGGGCCAAGAGAGTGCCCAGAACACAAAGTTCTTTAAACAAAAGGCAGCTGGGGTACGAGATGTATTTGAGCGGCCATCTGCCAAGAAGCGGAAAACTACTTAG

Related Sequences

bmy_10919T0 Protein

Length: 440 aa      View alignments
>bmy_10919T0
MSVPSSLMKQPPIQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRLRRLQNRISEDVEERLARHRKIVEPEVVGESDSEVEGDAWRMEREDSSEEEEEEIDDEEIERRRGMMRQRAQERKNEELEVMEVEDEGRSGEESESESEYEEYTDSEDEMEPRLKPVFIRKKDRVTVQEREAEALKQKELEQEAKRMAEERRKYTLKIVEEETKKELEENKRSLAALDALNTDDENDEEEYEAWKVRELKRIKRDREDREALEKEKAEIERMRNLTEEERRAELRANGKVITNKAVKGKYKFLQKYYHRGAFFMDEDEEVYKRDFSAPTLEDHFNKTILPKVMQVKNFGRSGRTKYTHLVDQDTTSFDSAWGQESAQNTKFFKQKAAGVRDVFERPSAKKRKTT*