Part of scaffold_582 (Scaffold)

For more information consult the page for scaffold_582 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

STRC ENSTTRG00000005846 (Bottlenosed dolphin)

Gene Details

stereocilin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005536, Bottlenosed dolphin)

Protein Percentage 90.14%
cDNA percentage 91.6%
Ka/Ks Ratio 0.6298 (Ka = 0.0198, Ks = 0.0314)

STRC ENSBTAG00000007503 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009875, Cow)

Protein Percentage 94.54%
cDNA percentage 92.98%
Ka/Ks Ratio 0.14759 (Ka = 0.0288, Ks = 0.1952)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5487 bp    Location:240533..256851   Strand:+
>bmy_10926
ACTCTGGTCCCTACTGGGCCTCAGTCCCTRGACCCTGGTCTCTCCCTCCTGAAGTCATTGCTCTCCGTTCTGGACCAGGCTCCCCAGGGGTCCCTCAGCCTCTCACGGTTCTCTGCATTCCTGGCCAACATTTCTTCTTCCTTTGAGCCTGGGAGAATGGGGGAGGGACCGGTGGGAGAGCCTCCACCTCTCCAGCCCCCTGCCCTCCGGCTCCATGATTTCTTAGTGACGCTGAGAGGCAGCCCAGACTGGGAGCCAATGCTGGGGCTGCTGGGGGATGTGCTGGCACTGCTGGGACAGGAGCAGACCCCCCGGGACTTCCTGGGGCACCAGGCAGGTGTGCTGCGTGGACTTGCAGAGGTCCTGCTGGGAGCCTTAGTTCCCGGGGGACCCCCTAACCCTACCCGGCCCCCATGCACCCGTGATGGGCCCTCTGACTGTGTTCTGGCAGCTGACTGGTTGCCTTCTCTGCTGCTGTTGTTAGAGGGCACACGCTGGCAGGCCCTGGTGCAGRTGCAGCCCAGCGTGGACCCCGCCAATGCCACAGGCCTCGATGGGAGGGAGCCAGCCCCCCACCTTTTGCAGGGTCTGTTGGCTTTGCTCACCCCAGTGGGGGAGCTGGGCTCTGAGGAAGCTCTTTGGGGAGGTCTGCTGCGCACAGTGGGGGCCCCCCTCTATGCTACCTTCCAGGAGGGGCTGCTCCGAGTCACTGACTCCCTGCAGGATGAGGTCTTTTCCATTCTGGGGCAACCAGAGCCTGATGTCAATGGGCAGTGCCAGGGAGGCAATCTTCAGCAGCTGCTCTTGGGCATCCGGCACAATCTCTCCTGGGATGTGCAGGCGCTGGGCTTTCTGTCTGGATCGCCACCTCCACCCCCCGCGCTCCTCCACTGCCTGAGCACAGCTGTGCCTCTGCCCAGGACTTCCCAGCCCTCAGCCAACATCAGCCCTCGCCAGCGGCGGGCCATCTCTGTGGAGGCCCTCTGCGAGAACTCCGCAGGCCCAGCACCGCCCTACAGCATTTCCAACTTCTCCCTCCACGTGATCTGCCAGCACATCAAGCCTGTCGCCCCGCAGCCCCCTCCCAGCACCGCTGCCATCTGCCAGACAGCTGTGTGGTATGCAGTCTCATGGGCACCRGGTGCCCAAGGCTGGCTCCAGGCCTGCCACGACCAGTTTCCCGAAGAGTTCCTGGAGGCAATCTGTAGCGACCTCTCCTTTTCCACCCTGTCGGGTTCCAACCGCCGCTTGGTAAAGCGGCTCTGTGCGGGCCTGCTCCCACCCCCCACCAGCTGCCCTGAAGGCCTGCCCCCTGTCCCCCTCACCCCAGAGATCTTCTGGGGCTGCTTCTTGGAGAACGAGACTCTGTGGGCTGAGCGGCTGTGTGGGGAGGCGAGTCTGCAGGCTGTGCCCCCCAGCAACCAGGCTTGGGTTCAGCATGTGTGCCAGGGCCCCACCCCAGATGTCACGGCCTCCCCACCCTGCCACATTGGCCCGTGTGGGGAGCGCTGCCCAGATGGGGGCAGCTTCCTGATGATGGTCTGTGCCAATGACACCATGTACGAGGCCCTGGTGCCCTCCTGGCCTTGGCTAGCAGGCCAGTGCAGGATAAGTCGTGGGGGCAATGATACTTGCTTCCTGGAGGGGTTACTGGGCCCTCTTCTGCCATCTCTGCCCCCACTGGGACCGTCCCCACTTTGCCTGGCCCCAGGCCCCTTCCTGCTTGGCATGCTGTCCCAGCTGCCACGCTGTCAGTCCTCCGTGCCGGCCCCTGCCCACCCCACACGCCTACACTATCTCCTGCGCCTGCTGACCTTCCTCCTGGGTCCAGGCGCTGGAGGGAACGAGGCCCAGGGGATGCTGGGTCAGGCCCTGATGCTCTCCAGTCTCCCAGACAACTGCTCCTTCTGGGATGCCTTCCGCCCCGAGGGCCGGCGCAGTGTGCTGCGGACAGTCGGGGAGTACCTGGAACAGGAGGAGCAGCCGACCCCCCTGGACTTTGACTCCACTGCCAGCTCCAGCTCTGGTTTAAGCAAGATGGAGCTGCTGGCCTGCTTCAGCCCTGTGCTGTGGGATCTGCTCCAGAGGGAGAAGAGTGTTTGGGCCCTGCAGATTCTAGTGCAGGCATACCTGCACATGCCGCCAGAAAATCTCCAGCAGCTGGTGCTTTCAGCGGAGAGCGAGGCTGCTCAGGGCTTCCTGACGCTCATGCACCGTTCATGGGCCCAGCTGCAGGTGGGCACGGAGCGAGAAGGGAACGAGGGTGGCGGGGGAAATCTAGGAATCAAGAGCACCTGGAACCAGGTAGGTAGTGGGCTCGCTCCAGCAGAAGGAGGAACTCAGCAAGGGAGATGGCCAGAAGAGTGGGCATCCCCAGCGCCGGCATTCATTCCTGTGCCCCCACAGGTGCCACCATCTGAGGAGCAGGCCCTGGGTCGTCTGACAGCCTTGCTGCTCCAGCGGTACCCGCGCCTCACCTCCCAGCTCTTCATCGATCTCTCACCACTCATCCCCTTCTTGGCTGTCTCCGACCTGATGCGCTTCCCACCATCCCTGTTGGCCAATGACAGCGTCCTGGCTGCCATCCGGAATTACAGCCCTGGAATGAGGCCTGAACAGAAGGAGGCTCTGGCAAGGCGACTGCTGGCCCCTGAGCTGTTTGGGGAAGTGCCCGCCTGGCCCCAGGAGCTGCTATGGGCAGCGCTGCCCCTGCTCCCCCATCTGCCTCTGGAGAACTTTCTGCAACTCAGCCCTCATCAGATCCAGGCCCTGGAGGATAGCTGGCCAGCGGCAGGTCTTGGGCCAGGACACGCCCGACATGTGCTGCGCAGCCTGGTGAACCAGAGTGTCCAGGATGGAGAGGAGCAGGTGCGCAGGCTGGGGCCCCTCGCCTGTTTCCTGAGCCCTGAGGAGCTGCAGAGCCTGGTACCCTTGAACGATCCAATGGGGCCGGTAGAACGGGGGCTGCTGGAATGTGCGGCCAACGGGACCCTCAGCCCACAAGGACGGGTAGCATATGAACTTCTGGGGGTGTTGCGCTCATCTGGAGGAACTGTGCTGAGCCCCCGGGAGCTTCGAGTTTGGGCCCCTCTCTTCCCTCAGCTGGGCCTCCGCTTCCTGCAGGAGCTGTCAGAGCCCCAGCTTAGAGCCATGCTTCCTGTGCTGCAAGGAACCAGTGTCACACCTGCCCAGGCTGTCCTACTGCTTGGACGGCTCCTCCCTAGGCATGACCTGTCCCTGGAGGAACTCTGCTCCTTGCACCCTCTGCTTCCAGGCCTCAGCTCCCAGACATTCCAGGCCATCCCTAGGCGAGTTCTGGTTGGGGCCTGTTCCTGCCTGGCCCCTGAACTGTCACGCCTCTCAGCCTGCCAGACCGCAGCACTGCTGCAGACCTTCCGGCAGGGAGGATGGCCAATCAGGGATGAGGGCTCTGGTTGGGAGGAGGGCATCTTCCCTGTGCCCAGGGAAGGCCCCTCAAACCTCACCACTTTTACACACACACACACACACACACATACATACACGCAGCCAATTCTCATGCAGGTGAAAGATGGAGTTAAAAACATGGGTGCAACAGGTGCCAGTGCAGCCGTGTGTATCCCTGGTCAGCAGCCTATCCCCACCACCTGGCCAGACTGCCTGCTGCCTCTGCTCCCACTAAAGCTGCTACAGCTGGAGTCTGCTGCTCTTCTGGCTGACCGAAGGCATTACCGGGAGCTGCCCTGGGCTCTGGGTACTCTGGCAGGGGGCATGTCCTGTGAGTTTCTGCAGCAGATCAACTTGATGGCAGACTTCCTTGAAGTGGTACACATGATCTATCAACTGTCCACTGGGGTTCGAGGGAGCCTGAGGACCTGTATCTGGGCAGAGCTACAGAGGAGGATGGCAATGCCAGAGCCAGAGCTGGCAACCCTGGGGCCAGAACTGAGTGGACTGGACACCAAGCTACTCCTGGACTTACCGGTCCAGTTGATGGACAGACTGTCCAGTGAATCCATTATGTTGGTGGTGGAGCTGGTACGAGGCACTCCAGAGCAGCTGCTGGCACTGACCCCACTCCACCGGGCAGCCCTGGCAGAAAGGGCACTACAAAACTTGACTGGTCCTCTGAGCCAGCGGTGCATTGTCCCAAGGCCTGATGCCCCTCTCCAGGCTCCAAAGGAGACAACAGTGTCAAGGGAAGTGCTGGAGACACTGGGTCCCTTGGTTGGATTCCTGGGGATAGAGAGCACACGACGGATCCCCCTACAGATCCTGCTGGCCCATCTCAGTCAGCTGCAGGGCATCTGCCTAGGAGAGCCATTTGCCACAGAGCTGGGATGGCTGCTGTTGCAGGAGCCTGTTCTTGGGAAACCAGAGTTATGGAGCCAGGATGAAGTTGAGCAAGCAGGACGCCTAGTATTCACTCTGTCTCCCGAGGCTATTTCCTTGATCCCCAGGGAGGCCTTGGGCCCAGAGACCCTGGAGAGGCTCCTAGAAAAGCAGCAGAGCTGGGAGCAGAGCAGAGCTGGACAGCTGTGTGCAGGGCCACAGCTCACTGCCAAGAAAGCAGCCCTGGTAGCTGGGGTTGTGCGGCCCACCGCAGAGGATCTCCCAGAACCTGTGCCAAATTGTGCAGATGTACGGGGAACATTCCCATCAGCCTGGTCTGCAACCCAGATCGCAGAGATGGAGCTTTTAGACTTTGAGGACTGCCTAGCACTGTTTGCAGGAGACCCAGGACTTGGGCCTGAGGAACTACGGGCAGCGATGGGCAAAGCAAAACAAGTTAGTCTAGGAGAGAGGGAACTACAGGAGCTGAGCCTGGTGGACTGGGGTGTGCTGAGCACCCTGGGTCAGATAGATGGCTGGAGCTCCATCCAGCTCCGGGTTGTGGTCTCCAGTTTCCTGAAGCAGAGCGGTCGGCACGTGAGCCACCTGGACTTCCTCCACCTGACTGCACTGGGTTACACGCTCTGTGGACTTTGGCCAGAGGAGCTGCAGCATATCAACAGTTGGGAGTTTAGCCAAGCAGCTCTCTTCCTGGGCAACCTGCATCTCCCGTGTTCTGAGGAGCAACTGGAGGTTCTGGCCCAGCTCCTTGTGCTGCCTGGTGGTTTTGGCCCAGTCAGTAACTGGGGGCCTGAGATCTTCACTGAAATTGGTACAATAGCAGCTGGAATCCCAGACCTGGCTCTTTCAGCACTGCTGCGAGGACAGATCCAGGGCCTTACCCCTCTGGCCATTTCTGTCATCCCTCCTCCGAAATTTGCTGTGGTGTTCAGCCCCACCCAGCTATCTAGTCTCACCAGTGTTCAGGCTGTGGCTGTCACTCCTGAGCAAATGGCCTTTCTGAGTCCTGAGCAGCGACGAGCAGTTGCATGGGCCCAGTATGAGGGGAAGGAGACCCCAGAACAGCAGGGTCGAAGCACAGCCTGGGGTCTCCAGGACTGGTCACAACCCTCCTGGGCCCTGGCATTGACCATCTACTTCCTTGGCAACCTGCTA

Related Sequences

bmy_10926T0 Protein

Length: 1829 aa      View alignments
>bmy_10926T0
TLVPTGPQSLDPGLSLLKSLLSVLDQAPQGSLSLSRFSAFLANISSSFEPGRMGEGPVGEPPPLQPPALRLHDFLVTLRGSPDWEPMLGLLGDVLALLGQEQTPRDFLGHQAGVLRGLAEVLLGALVPGGPPNPTRPPCTRDGPSDCVLAADWLPSLLLLLEGTRWQALVQXQPSVDPANATGLDGREPAPHLLQGLLALLTPVGELGSEEALWGGLLRTVGAPLYATFQEGLLRVTDSLQDEVFSILGQPEPDVNGQCQGGNLQQLLLGIRHNLSWDVQALGFLSGSPPPPPALLHCLSTAVPLPRTSQPSANISPRQRRAISVEALCENSAGPAPPYSISNFSLHVICQHIKPVAPQPPPSTAAICQTAVWYAVSWAPGAQGWLQACHDQFPEEFLEAICSDLSFSTLSGSNRRLVKRLCAGLLPPPTSCPEGLPPVPLTPEIFWGCFLENETLWAERLCGEASLQAVPPSNQAWVQHVCQGPTPDVTASPPCHIGPCGERCPDGGSFLMMVCANDTMYEALVPSWPWLAGQCRISRGGNDTCFLEGLLGPLLPSLPPLGPSPLCLAPGPFLLGMLSQLPRCQSSVPAPAHPTRLHYLLRLLTFLLGPGAGGNEAQGMLGQALMLSSLPDNCSFWDAFRPEGRRSVLRTVGEYLEQEEQPTPLDFDSTASSSSGLSKMELLACFSPVLWDLLQREKSVWALQILVQAYLHMPPENLQQLVLSAESEAAQGFLTLMHRSWAQLQVGTEREGNEGGGGNLGIKSTWNQVGSGLAPAEGGTQQGRWPEEWASPAPAFIPVPPQVPPSEEQALGRLTALLLQRYPRLTSQLFIDLSPLIPFLAVSDLMRFPPSLLANDSVLAAIRNYSPGMRPEQKEALARRLLAPELFGEVPAWPQELLWAALPLLPHLPLENFLQLSPHQIQALEDSWPAAGLGPGHARHVLRSLVNQSVQDGEEQVRRLGPLACFLSPEELQSLVPLNDPMGPVERGLLECAANGTLSPQGRVAYELLGVLRSSGGTVLSPRELRVWAPLFPQLGLRFLQELSEPQLRAMLPVLQGTSVTPAQAVLLLGRLLPRHDLSLEELCSLHPLLPGLSSQTFQAIPRRVLVGACSCLAPELSRLSACQTAALLQTFRQGGWPIRDEGSGWEEGIFPVPREGPSNLTTFTHTHTHTHTYTQPILMQVKDGVKNMGATGASAAVCIPGQQPIPTTWPDCLLPLLPLKLLQLESAALLADRRHYRELPWALGTLAGGMSCEFLQQINLMADFLEVVHMIYQLSTGVRGSLRTCIWAELQRRMAMPEPELATLGPELSGLDTKLLLDLPVQLMDRLSSESIMLVVELVRGTPEQLLALTPLHRAALAERALQNLTGPLSQRCIVPRPDAPLQAPKETTVSREVLETLGPLVGFLGIESTRRIPLQILLAHLSQLQGICLGEPFATELGWLLLQEPVLGKPELWSQDEVEQAGRLVFTLSPEAISLIPREALGPETLERLLEKQQSWEQSRAGQLCAGPQLTAKKAALVAGVVRPTAEDLPEPVPNCADVRGTFPSAWSATQIAEMELLDFEDCLALFAGDPGLGPEELRAAMGKAKQVSLGERELQELSLVDWGVLSTLGQIDGWSSIQLRVVVSSFLKQSGRHVSHLDFLHLTALGYTLCGLWPEELQHINSWEFSQAALFLGNLHLPCSEEQLEVLAQLLVLPGGFGPVSNWGPEIFTEIGTIAAGIPDLALSALLRGQIQGLTPLAISVIPPPKFAVVFSPTQLSSLTSVQAVAVTPEQMAFLSPEQRRAVAWAQYEGKETPEQQGRSTAWGLQDWSQPSWALALTIYFLGNLL