Sequence details bmy_10943 (Coding sequence)

Part of scaffold_582 (Scaffold)

For more information consult the page for scaffold_582 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBR1 ENSTTRG00000015944 (Bottlenosed dolphin)

Gene Details

ubiquitin protein ligase E3 component n-recognin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015121, Bottlenosed dolphin)

Protein Percentage 91.81%
cDNA percentage 92.17%
Ka/Ks Ratio 0.33234 (Ka = 0.0148, Ks = 0.0444)

UBR1 ENSBTAG00000021087 (Cow)

Gene Details

E3 ubiquitin-protein ligase UBR1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028086, Cow)

Protein Percentage 95.38%
cDNA percentage 95.06%
Ka/Ks Ratio 0.17713 (Ka = 0.0245, Ks = 0.1382)

UBR1  (Minke Whale)

Gene Details

ubiquitin protein ligase E3 component n-recognin 1

External Links

Gene match (Identifier: BACU004934, Minke Whale)

Protein Percentage 97.76%
cDNA percentage 98.43%
Ka/Ks Ratio 0.65068 (Ka = 0.0136, Ks = 0.021)

Additional orthologs identified in other species via the OPTIC pipeline.

UBR1 (Human)   Ubr1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 5157 bp    Location:700114..848231   Strand:+
Raw sequence 
>bmy_10943
ATGGCGGAGGAGGAGGCTGGGGACGCAGAAAGGATGGAAGTCAGCACTGAGTTGCCCCAGACTCCACGACGACTGGCGTCTTGGTGGCATCAGCAAATTGATTTTCATACTACTTTCTTGAACCATTTGGCACGATTGGTGCCAGAAATTTATTTTGCTGAAATGGACCCAGACTTAGAAAAGCAGGAGGAGAATATACAAATGTCAATATTCACTCCACTGGAATGGTACTTATTTGGAGAAGATCCAGATATTTGCTTAGAGAAATTGAAGCACAGTGGAGCATTTCAACTCTGTGGGAAGGTTTTCAAAAGTGGAGAGACAACATATTCTTGTAGTATGTTTTTCTATACTTTCTTGCAGAACTTACGCTGTCCGTTGAATGAAGAGGTAATTGCCCAAGCCAGGAAAATATTCCCTTCAGTGATAAAATACATTGTAGAAATGACTGTATGGGAAGAGGAAAAAGAACTGCCTCCTCAACTCCAGATAAGAGAGAAAAATGATAGCTACTACTGTGTCCTTTTCAATGATGAACACCATTCATATGACCATGTCATATACAGTCTACAAAGAGCTCTTGACTGTGAGCTCGCAGAGGCGCAGTTGCACACCACTGCCATAGACAAAGAGGGCCGTCGGGCTGTTAAAGCAGGTGCTTTTGCTGCTTGCCAGGAAGCAAAGGAAGATATAAAGAGTCATTCAGAAAATGTCTCTCAACATCCACTTCATGTAGAAGTATTACACTCTGAGGTTATGGCTCATCAGAAATTTGCTTTGCGTCTGGGGTCCTGGATGAATAAAATTATGAGCTATTCAAGTGACTTCAGGCAGATCTTTTGCCAAGCATGCCTTAGAGAAGAACCTGGCTCTGAGAATCCCTGTCTCATAAGCAGGTTAATGCTTTGGGATGCAAAGCTTTATAAAGGTGCCCGTAAGATCCTTCAYGAATTGATCTTCAGCAGTTTTTTTATGGAGATGGAATACAAAAAATTCTTTGCTATGGAATTTGTGAAGTATTATAAGCAGCTACAGAAAGACTATATCAATGATGATCATGACAGAAGTATCTCTATAACTGCACTCTCAGTTCAGATGTTTACTGTTCCTACTTTGGCTCGACATCTTATTGAAGAGCAAAATGTTATCTCTGTCATCACTGAAACTCTGCTGGAAGTTTTGCCTGAGTACTTGGATAGGAACAATAAATTCAACTTCCAGGGTTATAGCCAGGACAAATTGGGAAGAGTATATGCAGTAATATGTGATCTAAAGTATATCCTGATCAGCAAGCCCGCAGTATGGAYGGAAAGATTAAGAATGCAGTTCCTTGAAGGCTTTAGATCTTTTTTGAAGATTCTTACCTGTATGCAGGGAATGGAAGAAATCAGAAGACAGGTTGGGCAACACATAGAAGTGGATCCTGACTGGGAGGCTGCCATTGCTATACAGATGCAATTGAAGAATATTTTACTAATGTTCCAAGAGTGGTGCGCTTGTGATGAGGAACTCTTACTGGTGGCTTATAAAGAATGTCATAAAGCTGTGATGAGGTGCAGTACAAGTTTCAAATCTAGTAGCAAAACAGTAGTACAATTGTGCGGTCATACTTTGGAAACTAAATCCTACAGAGTATCTGAAGATCTTGTAAGCATACATCTGCCACTCTCTAGGACTCTTGCTGGTCTTCATGTGCGTTTAAGCAGGCTGGGTGCTATTTCAAGACTGCATGAATTTGTGCCTTTTGAGGATTTTCAAGTAGAGGTACTAGTGGAATATCCTTTGCGTTGTCTGGTATTGGTTGCCCAGGTTGTTGCTGAGATGTGGCGAAGAAATGGGCTGTCTCTCATTAGCCAGGTGTTTTATTACCAAGATGTTAAGTGCAGAGAAGAAATGTATGATAAAGATATCATTATGCTTCAGATTGGTGCATCTTTAATGGATCCCAACAAATTCTTATTACTGGTACTTCAGAGGTATGAACTTGCTGATGCTTTTGACAAGACCATATCCATAAAAGACCAGGATTTGATTAAACAATATAATACCTTAATAGAAGAAATGCTTCAAGTCCTCATCTATATTGTGGGAGAGCGTTATGTACCTGGAGTGGGAAATGTGACCAAAGAAGAGGTCACAATGAGAGAAATTATTCACTTGCTTTGTATTGAACCCATGCCACACAGTGCCATTGCCAAAAATTTACCTGAGAATGAAAATAATGAAACTGGCTTAGAGAATGTCATAAACAAAGTGGCCACATTTAAGAAACCAGGTGTATCAGGCCATGGAGTTTATGAGCTGAAAGATGAATCATTGAAAGACTTCAATATGTACTTTTATCATTACTCCAAAACACAGCATAGCAAGGCTGAACATATGCAGAAGAAAAGGAGAAAACAGGAAAACAAAGATGAAGCATTACCACCACCTCCTCCTCCTGAATTCTGCCCTGCTTTCAGCAAAGCAGTTAACCTTCTCAATTGTGATATCATGATGTACATTCTCAGGACCATATTTGAGCAGGCAGTAGACCCAGATTCTAACTTGTGGACTGAAGGGATGCTCCAAATGGCCTTTCATATTCTGGCATTGGGCTTACTAGAAGAAAAGCAACAGCTTCAAAAATCTCCCGAAGAAGAAGTGACATTTGACTTTTACCATAAGGCCTCAAGATTGGGAAGTTCAGCCATGAATGCTCAGAATATACAAATGCTTTTAGAAAAACTCAAGGGAATTCCCCAGTTAGAAGGCCAGAAGGACATGATTACATGGATACTCCAGATGTTTGACACCGTGAAGCGATTAAGAGAAAAATCTTGTTTAATTGTAGCAACTACATCAGGATCAGAATCTATTAAGAATGATGAGATTACTCATGATAAAGAAAAAGCAGAACGAAAAAGAAAAGCTGAAGCTGCTAGGCTGCATCGCCAGAAGATCATGGCTCAGATGTCCGCCTTACAGAAGAACTTTATTGAAACTCACAAACTCATGTATGACAGTACGTCAGAAATGTCTGGGAAAGAAGACTCCATTATGGAGGAAGAGAGCACCCCAGCAGTCAGTGACTACTCTAAAATTGCTTTGGGTCCTAAACGGGGTCCGTCTGTTACTGAAAAGGAGGTGCTGACATGCATCCTCTGCCAAGAAGAACAAGAGGTGAAACTAGAAAATAATGCCATGGTATTATCGGCCTGTGTCCAGAAATCCACCGCCTTAACCCAGCACAGGGGAAAACCCATAGAACTCTCAGGGGAAACCRTGGACCCACTTTTCATGGATTCAGACTTGGCATATGGAACTTACACAGGAAGCTGTGGTCATGTAATGCATGCAGTGTGCTGGCAGAAGTATTTTGAAGCTGTACAGCTGAGCTCTCAGCAACGCATTCATGTTGACCTTTTTGACTTAGAGAGTGGAGAATATCTTTGTCCTCTTTGCAAGTCTCTGTGCAATACTGTGATCCCCATTATTCCTTTGCAACCTCAAAGGATAAGCAGTGAGAATACAGAAGCTCTTGCTCAACTTTTGACCCTGGCACGATGGATACAGACTGTTCTGGCCAGAATAACAGGTTATAATATGAAACATGCTAAAGGAGAAAAGCCAACAATGCCAGTCTTGTTTGATCAAGGAATGGGTGATTCCACTTTTGAGTTCCAYTCTATTCTGAGTTTTGGAGTTCAGTCTTCGATAAAATATTCTAATAGCATCAAGGAAATGGTCCTTCTCTTTGCCACAACAATTTATAGAATTGGATTGAAAGTGCCTCCTGATGAAACGGATCCTCGAATCCCCATGATGACCTGGAGCACATGTGCTTTCACTATCCAGGCAATTGAAAACCTCTTGGGAGATGAAGGAAAACCCTTGTTTGGAGCACTTCAAAATAGACAGCATAATGGTCTCAAAGCATTAATGCAGTTTGCCATTGCACAAAGGATTACCTGTTCTCAGGTCCTGATACAGAAACATCTGATTCGTCTTCTATCAGTTGTTCTTCCTAACCTAAAATCAGAAGCTACACCTTGCCTTCTATCTGTAGATCTATTTCATGTTTTGGTGGGTACTGTGTTAGCATTCCCATCCTTGTATTGGGATGATGCTGTTGATCTGCAGCCTTCATCAATTAGTTCTTCCTATAACCACCTTTATCTCTTCCATTTGATCACCATGGCACACATGCTTCAGATACTTCTTACCACAGACACAGGCCTCCCCCTTGCACAAATTCAAGAAGAGAGCGAAGAGGCTCGTTCTGCATCTTCTTTCTTGGCAGAAGTTTCTCAGTATACAAGTGGCTGCATTGGGTGTGGTATTCCTGGCTGGTATTTATGGGTCTCGTTGAAGAATGGCATCATCCCTTATCTTCGCTGTGCTGCATTGTTTTTCCACTATTTACTTGGAGTAACTCCACCTGAAGAACTATTTACCAATCCTGCAGAAGGAGAGTACAGTGCACTCTGTAGCTATTTATCTTTACCCACAAATTTGTTCCTGCTTTTCCAGAAATATTGGGATACTGTAAGGCCCCTCCTGCAGAGGTACTGTGGGATGGTGTACAGACCCTGCCTTACTAAACTGTTTGAAGCAAAAAAGCGCCATAGTCAGGTTGGTTTTACTTCTCAATCCTTCCCCATCTACAAGTTGTGTTTCCAAAAGTACCCTAGAAAAAGAAATAGTTTGATAGAGCTTCCTGATGACTATAGCTGCCTCCTAAATCAAGCTTCTCATTTCAGGTGCCCACGGTCTGCAGATGACGAGCGAAAGCACCCTGTCCTCTGTCTTTTCTGCGGAGCCATACTGTGTTCTCAGAACATTTGCTGCCAAGAAATTGTGAATGGGGAAGAGGTGGGAGCTTGCATTTTTCATGCCCTTCACTGTGGAGCTGGAGTCTGCATTTTCCTAAAAATCAGAGAATGTAGAGTAGTCCTGGTTGAAGGTAAAGCCAGAGGTTGTGCCTATCCAGCCCCTTATTTGGATGAATATGGAGAAACAGACCCTGGCCTGAAGAGGGGCAACCCCCTTCATTTATCTCGTGAGCGGTATCGGAAGCTCCATTTGGTGTGGCAGCAACACTGCATCATAGAAGAGATTGCTAGGAGCCAGGAAACTAATCAGATGTTATTCGGATTCAACTGGCAGTTACTGTGA

Related Sequences

bmy_10943T0 Protein

Length: 1719 aa      View alignments
>bmy_10943T0
MAEEEAGDAERMEVSTELPQTPRRLASWWHQQIDFHTTFLNHLARLVPEIYFAEMDPDLEKQEENIQMSIFTPLEWYLFGEDPDICLEKLKHSGAFQLCGKVFKSGETTYSCSMFFYTFLQNLRCPLNEEVIAQARKIFPSVIKYIVEMTVWEEEKELPPQLQIREKNDSYYCVLFNDEHHSYDHVIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGAFAACQEAKEDIKSHSENVSQHPLHVEVLHSEVMAHQKFALRLGSWMNKIMSYSSDFRQIFCQACLREEPGSENPCLISRLMLWDAKLYKGARKILHELIFSSFFMEMEYKKFFAMEFVKYYKQLQKDYINDDHDRSISITALSVQMFTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQGYSQDKLGRVYAVICDLKYILISKPAVWXERLRMQFLEGFRSFLKILTCMQGMEEIRRQVGQHIEVDPDWEAAIAIQMQLKNILLMFQEWCACDEELLLVAYKECHKAVMRCSTSFKSSSKTVVQLCGHTLETKSYRVSEDLVSIHLPLSRTLAGLHVRLSRLGAISRLHEFVPFEDFQVEVLVEYPLRCLVLVAQVVAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNKFLLLVLQRYELADAFDKTISIKDQDLIKQYNTLIEEMLQVLIYIVGERYVPGVGNVTKEEVTMREIIHLLCIEPMPHSAIAKNLPENENNETGLENVINKVATFKKPGVSGHGVYELKDESLKDFNMYFYHYSKTQHSKAEHMQKKRRKQENKDEALPPPPPPEFCPAFSKAVNLLNCDIMMYILRTIFEQAVDPDSNLWTEGMLQMAFHILALGLLEEKQQLQKSPEEEVTFDFYHKASRLGSSAMNAQNIQMLLEKLKGIPQLEGQKDMITWILQMFDTVKRLREKSCLIVATTSGSESIKNDEITHDKEKAERKRKAEAARLHRQKIMAQMSALQKNFIETHKLMYDSTSEMSGKEDSIMEEESTPAVSDYSKIALGPKRGPSVTEKEVLTCILCQEEQEVKLENNAMVLSACVQKSTALTQHRGKPIELSGETXDPLFMDSDLAYGTYTGSCGHVMHAVCWQKYFEAVQLSSQQRIHVDLFDLESGEYLCPLCKSLCNTVIPIIPLQPQRISSENTEALAQLLTLARWIQTVLARITGYNMKHAKGEKPTMPVLFDQGMGDSTFEFHSILSFGVQSSIKYSNSIKEMVLLFATTIYRIGLKVPPDETDPRIPMMTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQFAIAQRITCSQVLIQKHLIRLLSVVLPNLKSEATPCLLSVDLFHVLVGTVLAFPSLYWDDAVDLQPSSISSSYNHLYLFHLITMAHMLQILLTTDTGLPLAQIQEESEEARSASSFLAEVSQYTSGCIGCGIPGWYLWVSLKNGIIPYLRCAALFFHYLLGVTPPEELFTNPAEGEYSALCSYLSLPTNLFLLFQKYWDTVRPLLQRYCGMVYRPCLTKLFEAKKRHSQVGFTSQSFPIYKLCFQKYPRKRNSLIELPDDYSCLLNQASHFRCPRSADDERKHPVLCLFCGAILCSQNICCQEIVNGEEVGACIFHALHCGAGVCIFLKIRECRVVLVEGKARGCAYPAPYLDEYGETDPGLKRGNPLHLSRERYRKLHLVWQQHCIIEEIARSQETNQMLFGFNWQLL*