Part of scaffold_579 (Scaffold)

For more information consult the page for scaffold_579 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PACSIN1 ENSTTRG00000007801 (Bottlenosed dolphin)

Gene Details

protein kinase C and casein kinase substrate in neurons 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007373, Bottlenosed dolphin)

Protein Percentage 99.29%
cDNA percentage 99.13%
Ka/Ks Ratio 0.07686 (Ka = 0.0029, Ks = 0.038)

PACSIN1 ENSBTAG00000016124 (Cow)

Gene Details

Protein kinase C and casein kinase substrate in neurons protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000021459, Cow)

Protein Percentage 95.95%
cDNA percentage 94.97%
Ka/Ks Ratio 0.04834 (Ka = 0.0166, Ks = 0.3424)

PACSIN1  (Minke Whale)

Gene Details

protein kinase C and casein kinase substrate in neurons 1

External Links

Gene match (Identifier: BACU012208, Minke Whale)

Protein Percentage 99.32%
cDNA percentage 99.4%
Ka/Ks Ratio 0.10794 (Ka = 0.0027, Ks = 0.0251)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1434 bp    Location:163414..169915   Strand:+
>bmy_10958
ATGTCTGGCTCCTACGACGAGGCCTCGCTAGCTCCGGAGGAGACCACCGACAGCTTCTGGGAGGTGGGGAACTACAAGCGGACGGTGAAGCGCATCGATGACGGGCACCGGCTGTGCAACGACCTGATGAACTGCGTGCAGGAGCGCGCCAAGATCGAGAAGGCGTATGCGCAGCAGCTCACCGACTGGGCCAAGCGCTGGCGCCAGCTCATCGAGAAAGGCCCACAGTATGGCAGCCTGGAGCGGGCCTGGGGTGCCATGACGACGGAGGCAGACAAGGTGAGCGAACTGCACCAGGAGGTGAAGAACAGCCTGCTGAACGAGGACCTGGAGAAGGTCAAGAACTGGCAGAAGGATGCCTATCACAAGCAGATCATGGGCGGCTTCAAGGAGACCAAGGAGGCTGAAGACGGCTTCCGCAAGGCCCAGAAGCCCTGGGCCAAGAAGATGAAGGAGCTAGAGGCAGCCAAGAAGGCCTACCATCTGGCCTGCAAAGAGGAGAAGCTGGCCATGACCCGGGAGATGAATAGCAAGACGGAGCAGTCGGTCACACCCGAGCAGCAGAAGAAGCTGCAGGACAAAGTGGACAAGTGCAAGCAGGACGTGCAGAAGATGCAGGAGAAGTATGAGAAGGTGCTGGATGACGTGGGCAAGACCACACCCCAGTACATGGAGGGCATGGAGCAGGTGTTTGAACAGTGCCAGCAATTTGAGGAAAGGAGGCTGGTCTTCCTCAAGGAGGTGCTGCTAGACATCAAACGTCACCTCAACCTAGCTGAGAATAGCAGCTATGTTCAAGTGTACCGGGAGCTGGAGCAGGCCATCCGGGGGGCCGACGCCCAGGACGACCTCAGATGGTTCCGCAGCACCAGCGGCCCTGGCATGCCCATGAATTGGCCCCAGTTTGAGGTGAGGATGTGTGGGGATGGGGAAGGGGAATCTGAAACAGCTGGAAGGAGCCTCGGGGGGGCAGCCCCCCAGCCTGACTGCTCCCCTGACGCCCCCCAGGAGTGGAACCCAGACCTCCCGCACACCACCACCAAGAAGGAGAAACAGTCCAAGAAGGCAGAGGGGGTAGTGCTGACCAATGCTGCTGGGATGGTGGAGTCCACATCCCAGGCTGGGGACCGTGGCAGTGTTAGCAGCTACGACAGGGGCCAGACTTACGCCACTGAGTGGTCGGACGACGAGAGCGGGAATCCATTTGGGGGAAATGAGGCCAACGGGGGCTCCAACCCCTTCGATGAAGACGCCAAGGGAGTGCGTGTGCGGGCGCTCTACGACTACGACGGCCAGGAGCAGGACGAGCTCAGCTTCAAGGCTGGAGATGAGCTCACCAAGCTTGGCGAGGAGGACGAGCAGGGTTGGTGCCGCGGGCGGCTGGACAGCGGGCAGCTGGGCCTCTATCCCGCCAACTACGTGGAGGCCATCTAG

Related Sequences

bmy_10958T0 Protein

Length: 478 aa      View alignments
>bmy_10958T0
MSGSYDEASLAPEETTDSFWEVGNYKRTVKRIDDGHRLCNDLMNCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSLERAWGAMTTEADKVSELHQEVKNSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLACKEEKLAMTREMNSKTEQSVTPEQQKKLQDKVDKCKQDVQKMQEKYEKVLDDVGKTTPQYMEGMEQVFEQCQQFEERRLVFLKEVLLDIKRHLNLAENSSYVQVYRELEQAIRGADAQDDLRWFRSTSGPGMPMNWPQFEVRMCGDGEGESETAGRSLGGAAPQPDCSPDAPQEWNPDLPHTTTKKEKQSKKAEGVVLTNAAGMVESTSQAGDRGSVSSYDRGQTYATEWSDDESGNPFGGNEANGGSNPFDEDAKGVRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI*