Sequence details bmy_10967 (Coding sequence)

Part of scaffold_579 (Scaffold)

For more information consult the page for scaffold_579 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCUBE3 ENSTTRG00000009373 (Bottlenosed dolphin)

Gene Details

signal peptide, CUB domain, EGF-like 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008887, Bottlenosed dolphin)

Protein Percentage 92.37%
cDNA percentage 92.44%
Ka/Ks Ratio 0.19358 (Ka = 0.02, Ks = 0.1032)

SCUBE3 ENSBTAG00000009226 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000012158, Cow)

Protein Percentage 95.88%
cDNA percentage 94.07%
Ka/Ks Ratio 0.1044 (Ka = 0.0239, Ks = 0.2293)

SCUBE3  (Minke Whale)

Gene Details

signal peptide, CUB domain, EGF-like 3

External Links

Gene match (Identifier: BACU018059, Minke Whale)

Protein Percentage 95.52%
cDNA percentage 96.06%
Ka/Ks Ratio 0.34911 (Ka = 0.0302, Ks = 0.0866)

Additional orthologs identified in other species via the OPTIC pipeline.

SCUBE3 (Human)   Scube3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3111 bp    Location:778206..798321   Strand:+
Raw sequence 
>bmy_10967
ATGGAACTTCTTTCCTTTAAAGATTCTTGGCGCCATGGTGGGCAAGTGGAAGCAGGCCTGGTCTCAAGCGGAATTGAATTCAGAAAGATTCTGAAATCGGAGGGGTATGGGAGGCCACCTGCTTCTGGAGGGGTTGCTGTCTATTATGTGGACGAGTGTGTGGAGGGAACTGACAACTGCCACATCGACGCGATCTGCCAGAACACCCCACGGTCGTACAAGTGCATCTGCAAGTCTGGCTACACAGGGGATGGTAAACACTGCAAAGATGTGGATGAGTGTGAACGGGAGGATAATGCAGGTTGTGTGCACGATTGTGTCAACATCCCTGGCAATTACCGATGCACCTGCTATGATGGATTCCACCTGGCACATGACGGACACAACTGTCTGGATGTGGACGAGTGTGCCGAGGGCAACGGTGGCTGTCAGCAGAGCTGTGTCAACATGATGGGCAGTTATGAGTGCCACTGCCGGGAGGGCTTCTTCCTCAGCGACAACCAGCACACCTGCATCCAGCGGCCGGAAGAAGGAATGAATTGCATGAACAAGAACCATGGCTGTGCTCACATTTGCCGGGAGACACCCAAAGGGGGTATTGCCTGCGAATGCCGCCCTGGCTTCGAGCTCACCAAGAACCAACGGGACTGTAAATTGACGTGCAACTATGGTAATGGTGGCTGCCAGCACACGTGCGATGACACAGAGCAGGGTCCCCGGTGCGGCTGCCATGTCAAGTTTGTGCTCCATACCGACGGGAAGACGTGCATCGAGACCTGTGCTGTCAACAACGGGGGCTGCGACAGTAAGTGCCACGACGCAGCGACGGGCGTCCACTGCAGCTGCCCTGTGGGCTTCATGCTGCAGCCGGACAGGAAGACCTGCAAAGACATAGATGAGTGCCGCTTGAACAATGGGGGCTGTGACCACATTTGCCGCAACACAGTGGGCAGCTTCGAATGCAGCTGCAAGAAGGGCTATAAGCTTCTCATCAATGAGAGGAACTGCCAGGACATAGACGAGTGTTCCTTTGATCGAACCTGTGACCACATATGTGTCAACACGCCGGGGAGCTTCCAGTGCCTCTGCCATCACGGCTACCTGCTGTATGGTGTCACCCACTGTGGGGATGTGGATGAGTGCAGTATCAACCGGGGAGGTTGCCGCTCTGGCTGCATCAACACTCCTGGCAGCTACCAGTGTACCTGCCCAGCTGGCCAGGGCCGGCTGCACTGGAACGGGAAGGATTGCACAGGTGGGCAGCGCCCTCTGCTGGCTGAAGCTGGCACTGCAGTTTCAGGGTTGGGGGTAGTTGGGGTCCTGGGAAATGTGGAGTTCCATACTGAGGAAGAGCCAGTAAAGTGTCATAGTAGTCCTGGTGCCTCGAAAGCCATGATCAGCTGCAGTCGGTCTGGGAAGAAGGACACCTGTGCCCTGACCTGCCCCTCCCGGGCCCGGTTTTTGCCAGAGTCTGAGAATGGCTTCACCGTGAGCTGTGGCATCCCCAGCCCCAGGGCTGCTCCAGCCCGAGCTGGCCACACTGGGAACAGCACAAACTCCAACCACTGCCATGAGGCTGCAGTGCTGACGGTTAAACAGCGGGCTTCCTTCAAGATCAAAGATGCCAAATGCCGTTTGCACCTGAGAAACAAAGGCAAAACGGAGGAGGCCAGCAGAATCCTGGGGCCAGGGGGTGCCCCTGAGGTTGACAAGGCCTCTCCCCCAGGTGGTGCCCCCTGCTCTGACTGCCAGGTCACCTTCATCCACCTCAAGTGTGACTCCTCTCGGAAGGGCAAGGGCCGGCGGGCCCGGACCCCTCCAGGCAAGGAAGTCACTCGGCTCACCCTGGAACTGGAGGCAGAAGTCAGAGCCGAAGAAACCACAGCTGGCTGTGGGCTGCCCTGCCTCCGACAGCGGATGGAACGGCGGCTGAAAGGGTCCCTGAAGATGCTTAGAAAGTCCATCAACCAGGACCGCTTCCTACTGCGCCTGGCAGGCCTTGATTATGAGCTGGCCCACAAACCAGGCCCAGTAGCTGGGGAGCGAGTGGAACCAGTGGAGRCCTGTAGGCCCGGGCAGCACCGCTCTGGGGCCAAGTGTGTCAGCTGCCCGCAGGGAACGTATTACCACGGCCAGACGGAGCAGTGTGTGCCATGCCCAGCGGGCACCTTCCAGGAGAGAGAAGGGCAGCTCTCCTGCGACCTTTGCCCTGGGAGTGATGCCCACGGGCCTCTCGGAGCCACCAACGTCACCACATGTGCAGGTCAGTGCTCACCTGGCCAACACTCTGTAGATGGCTTCAAGCCCTGCCAGCCATGTCCACGTGGCACCTACCAACCTGAAGCGGGACGGACCCTGTGCTTCCCGTGCGGTGGGAGCCTCACCACCAAGCACGAGGGAGCCGCCTCCTTCCAAGACTGTGACACTAAAGTCCAGTGCTCCCCTGGGCACTACTACAACACCAGCATCCATCGCTGTATCCGCTGTGCCATGGGCTCCTATCAGCCTGACTTCCGTCAGAACTTCTGCACCCGCTGTCCAGGAAACACAAGCACTGACTTTGATGGCTCCACCAGTGTGGCCCAGTGCAAGAATCGCCAGTGTGGTGGGGAGCTGGGTGAGTTCACTGGCTATATCGAGTCTCCCAACTACCCAGGCAACTACCCAGCCGGCGTGGAGTGCGTCTGGAACATCAACCCCCCACCCAAGCGCAAGATTCTTATCGTGGTACCCGAGATCTTCCTGCCATCTGAGGACGAGTGTGGGGACGTCCTCGTCATGAGAAAGAACTCCTCCCCATCCTCCATTACCACCTATGAGACCTGCCAGACCTACGAGCGCCCCATCGCCTTCACAGCCCGCTCCAGGAAGCTCTGGATCAACTTCAAGACAAGTGAGGCCAACAGCGCCCGTGGCTTCCAGATTCCCTATGTTACCTATGATGAGGATTATGAGCAGCTGGACAAGAAGCTCATTAAGGCCTTCTTCGAGGTGCTGGCCCACCCCCAGAACTACTTCAAGTACACAGAGAAGCACAAGGAGATGCTGCCCAAATCCTTCATCAAGCTGCTCCGCTCCAAAGTTTCCAGCTTCCTGAGGCCCTACAAATAG

Related Sequences

bmy_10967T0 Protein

Length: 1037 aa      View alignments
>bmy_10967T0
MELLSFKDSWRHGGQVEAGLVSSGIEFRKILKSEGYGRPPASGGVAVYYVDECVEGTDNCHIDAICQNTPRSYKCICKSGYTGDGKHCKDVDECEREDNAGCVHDCVNIPGNYRCTCYDGFHLAHDGHNCLDVDECAEGNGGCQQSCVNMMGSYECHCREGFFLSDNQHTCIQRPEEGMNCMNKNHGCAHICRETPKGGIACECRPGFELTKNQRDCKLTCNYGNGGCQHTCDDTEQGPRCGCHVKFVLHTDGKTCIETCAVNNGGCDSKCHDAATGVHCSCPVGFMLQPDRKTCKDIDECRLNNGGCDHICRNTVGSFECSCKKGYKLLINERNCQDIDECSFDRTCDHICVNTPGSFQCLCHHGYLLYGVTHCGDVDECSINRGGCRSGCINTPGSYQCTCPAGQGRLHWNGKDCTGGQRPLLAEAGTAVSGLGVVGVLGNVEFHTEEEPVKCHSSPGASKAMISCSRSGKKDTCALTCPSRARFLPESENGFTVSCGIPSPRAAPARAGHTGNSTNSNHCHEAAVLTVKQRASFKIKDAKCRLHLRNKGKTEEASRILGPGGAPEVDKASPPGGAPCSDCQVTFIHLKCDSSRKGKGRRARTPPGKEVTRLTLELEAEVRAEETTAGCGLPCLRQRMERRLKGSLKMLRKSINQDRFLLRLAGLDYELAHKPGPVAGERVEPVEXCRPGQHRSGAKCVSCPQGTYYHGQTEQCVPCPAGTFQEREGQLSCDLCPGSDAHGPLGATNVTTCAGQCSPGQHSVDGFKPCQPCPRGTYQPEAGRTLCFPCGGSLTTKHEGAASFQDCDTKVQCSPGHYYNTSIHRCIRCAMGSYQPDFRQNFCTRCPGNTSTDFDGSTSVAQCKNRQCGGELGEFTGYIESPNYPGNYPAGVECVWNINPPPKRKILIVVPEIFLPSEDECGDVLVMRKNSSPSSITTYETCQTYERPIAFTARSRKLWINFKTSEANSARGFQIPYVTYDEDYEQLDKKLIKAFFEVLAHPQNYFKYTEKHKEMLPKSFIKLLRSKVSSFLRPYK*