Sequence detailsbmy_10969 (Coding sequence)

Part of scaffold_579 (SequenceType object (1))

For more information consult the page for scaffold_579 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DEF6ENSTTRG00000009401 (Bottlenosed dolphin)

Gene Details

differentially expressed in FDCP 6 homolog (mouse)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008912, Bottlenosed dolphin)

Protein Percentage 95.35%
cDNA percentage 95.93%
Ka/Ks Ratio 0.17686 (Ka = 0.0247, Ks = 0.1397)

DEF6ENSBTAG00000025622 (Cow)

Gene Details

differentially expressed in FDCP 6 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000036015, Cow)

Protein Percentage 93.92%
cDNA percentage 92.75%
Ka/Ks Ratio 0.07826 (Ka = 0.0306, Ks = 0.391)

DEF6 (Minke Whale)

Gene Details

differentially expressed in FDCP 6 homolog (mouse)

External Links

Gene match (Identifier: BACU018057, Minke Whale)

Protein Percentage 96.64%
cDNA percentage 97.71%
Ka/Ks Ratio 0.33917 (Ka = 0.0183, Ks = 0.0539)

Additional orthologs identified in other species via the OPTIC pipeline.

DEF6 (Human)   Def6 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1968 bp    Location:841675..863270   Strand:+
Raw sequence 
>bmy_10969
ATGGCCCTGCGCAAGGAGCTGCTTAAGTCCGTCTGGTACGCTTTCACCGCGCTGGACGTGGAGAAGAGCGGCAAGGTCTCCAAGTCCCAGCTCAAGGATGGGGGTGGGGACAAGTGGGGAGGTGGGAGCCGCCCTTTGACCCAGTTTTGGTTGGGGTTCAGGAAGGCAAACTGCCCTCTGTCTCAGGTGCTGTCCCACAACCTGTACACCGTCCTGCACATCCCTCACGACCCTGTGGCCCTGGAGGAGCACTTCCGAGATGACGACGATGGCCCTGTGTCCAGCCAGGGGTACATGCCCTACCTCAACAAGTACATCCTGGACAAGGTGGAGGAGGGGGCTTTCGTTAAGGAGCACTTTGATGAGCTATGCTGGACCCTGACGGCCAAGAAGAACTATCGGGTGGATAGCAACGGGAACAGCATGCTCTCCAATCAGGATGCCTTCCGCCTCTGGTGCCTCTTCAACTTCCTGTCKGAGGACAAGTACCCTCTGATCATGGTTCCTGATGAGGTGGAATACCTGCTGAAGAAGGTGCTCAGCAGCATGAGCTTGGAGGTGGGCTTGGGTGAGCTGGAGGAGCTGCTGGCCCAGGAGGCCCAGGCAGCCCAGAGCACCAGCGGGCTCAGCGTCTGGCAGTTCCTGGAGCTCTTCAACTCAGGCCGCTGTCTGCGAGGCGTGGGGCGAGACACCCTCAGCATGGCCATCCACGAGGTCTACCAGGAACTCATCCAAGACGTCCTGAAGCAGGGCTACCTGTGGAAGCGAGGGCACCTGAGGAGGAACTGGGCAGAACGCTGGTTCCAGCTGCAGCCCAGCTGCCTCTGCTATTTCGGGAGTGAAGAGTGCAAGGAGAAAAGGGGTACAATCCTGCTGGATGCGCAGTGCTGCGTGGAGGTGCTGCCCGACCGAGAAGGCAAGCGCTGCATGTTCTGTGTGAAGACTGCCTCCCGCACGCTGCCCTGCCCCCGGCCAGCCCCTCCCGCTCCCTCCGCAGCCATCCAGACGGCGATCCGGCTGCAGGCCGAGGGGAAGATGTCGCTGCACAAGGACCTGAAGCAGAAGCGGCGCGAGCAGCGGGAGCAGCGGGAGCGGCGCCGGGTGGCCAAGGAGGAGGAGATGCTGCGGCTGCAGCAGCTACAGGAGGAGAAGGAGCGGAAGCTGCAGGAGCTGGAGCTGCTGCAGGAGGCGCAGCGTCAGGCCGAGCGCCTGCTGCAGGAGGAGGAGGAGCGGCGCCGCAGCCAGCACCGCGAGCTGCAACAGGCGCTCGAGGGCCAACTGCGCGAGGCTGAGCAGGCAAGGGCCTCCATGCAGGCTGAGATGGAGCTGAAGAAGGAGGAGGCTGCCCGGCAGCGGCAGCGCATCGAGGAGCTGGAGGAGATGCAGCAGAGGCTTCAGGAGGCCCTGCAACTGGAGGTGAAAGCTCGGCAGGACGAGGAGGCCGTGCGCCTAGCCCAGACCAGACTGCTGGAGGAGGAGGAGGACAAGTTGAAGCAGCTGCTGCAGCTGAAGGAGGAACAGGAGCGCTATATTGAGCAGGCACAGCAGGAGAAACAGGAACTGCAGCAGGAGATGGCCCTGCAGAGCCGCTCCCTGCAGCAGGCCCAGCAGCAGTTGGAGGAGGTGCGGCAGAACCGGCAGCGGGCCGACGAGGACGTGGAGCGGAAGTTGCGCCAGGCCAGTACCAACGTGAAACACTGGAATGTCCAGATGAACCGGCTCATGCATCCAATTGAACCTGGAGACAAGCGTCCCACCACCAGCAGCTCCTTCACAGGCTTCCAGGCCCCTCTACTCGCCCGCCGTGACTCCTCCCTAAAACGCCTGACTCACTGGGGATCCCACGACAACAAGACCCCCTCACCCAGCAGCAGTGAGCAGCAGAAGTCCCTCAATTGTGGGAAAGAGGCGCCCATCTCAGCTTCCGCCCCTCAGGAAGATAAAGTGGACCCAGCACCAGAAAACTAA

Related Sequences

bmy_10969T0 SequenceType object (3)

Length: 656 aa      View alignments
>bmy_10969T0
MALRKELLKSVWYAFTALDVEKSGKVSKSQLKDGGGDKWGGGSRPLTQFWLGFRKANCPLSQVLSHNLYTVLHIPHDPVALEEHFRDDDDGPVSSQGYMPYLNKYILDKVEEGAFVKEHFDELCWTLTAKKNYRVDSNGNSMLSNQDAFRLWCLFNFLSEDKYPLIMVPDEVEYLLKKVLSSMSLEVGLGELEELLAQEAQAAQSTSGLSVWQFLELFNSGRCLRGVGRDTLSMAIHEVYQELIQDVLKQGYLWKRGHLRRNWAERWFQLQPSCLCYFGSEECKEKRGTILLDAQCCVEVLPDREGKRCMFCVKTASRTLPCPRPAPPAPSAAIQTAIRLQAEGKMSLHKDLKQKRREQREQRERRRVAKEEEMLRLQQLQEEKERKLQELELLQEAQRQAERLLQEEEERRRSQHRELQQALEGQLREAEQARASMQAEMELKKEEAARQRQRIEELEEMQQRLQEALQLEVKARQDEEAVRLAQTRLLEEEEDKLKQLLQLKEEQERYIEQAQQEKQELQQEMALQSRSLQQAQQQLEEVRQNRQRADEDVERKLRQASTNVKHWNVQMNRLMHPIEPGDKRPTTSSSFTGFQAPLLARRDSSLKRLTHWGSHDNKTPSPSSSEQQKSLNCGKEAPISASAPQEDKVDPAPEN*