Sequence detailsbmy_10975 (Coding sequence)

Part of scaffold_579 (SequenceType object (1))

For more information consult the page for scaffold_579 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TULP1ENSTTRG00000009442 (Bottlenosed dolphin)

Gene Details

tubby like protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008951, Bottlenosed dolphin)

Protein Percentage 96.43%
cDNA percentage 96.24%
Ka/Ks Ratio 0.11803 (Ka = 0.0088, Ks = 0.0748)

TULP1ENSBTAG00000034287 (Cow)

Gene Details

tubby-related protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000055698, Cow)

Protein Percentage 84.46%
cDNA percentage 85.77%
Ka/Ks Ratio 0.18454 (Ka = 0.0941, Ks = 0.5098)

TULP1 (Minke Whale)

Gene Details

tubby like protein 1

External Links

Gene match (Identifier: BACU018053, Minke Whale)

Protein Percentage 99.82%
cDNA percentage 99.33%
Ka/Ks Ratio 0.02528 (Ka = 0.0008, Ks = 0.0303)

Additional orthologs identified in other species via the OPTIC pipeline.

TULP1 (Human)   Tulp1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1761 bp    Location:1017230..1003465   Strand:-
Raw sequence 
>bmy_10975
CTTGAGCCAGCAGGAGGTGGGGGTGAAGCTGAGCCCGGATTAGCTGGGGCCCGCGGGGAAGCTTCTAGGGCTGCAGGGTGGCCAGAGCAGGGGCTGTGGATAGGCACAGGCACCATGCCGCTGCAGGACGACACCCTCCGAGAGGTGTGGGCCTCAGACAGCGGGCATGAAGAAGAAGGCCAGAGCCCGGAGGTCCAGCAGCGCACCAAGCAGCGACAGAAGTTGAGGAAGAAGAAGACAGAAGCCCCAGAGTCCCCCTGCCCCACGGGATCCAAGCCCCGGAGACCTGGAGGCGTGCGGAAGGCTGAGCCCCGGGGCGCCCCCCAGGCGGGACGGAGGAGGAGCCCGCGGGAGGAGCCCTCCCGGGAGCCCGCCGAGGCCAGGGAGCTGCAGACGGTCTACGCCAAGTTCCTCAGGGACCCCGAGGCCAAGAAGCGCGACCCCCGGGAGACCTTCCTGGTAGCCCGCGCCCCAGACGCGGAGGACGGGGATGAGGAGGAGGAAGAGGACAAGGAGGAGAAGGAAAAGAAAGAGAAAATCCGTCTGCCTCCCAAGAAGCCCCCCAAAGAGAAGGCTTCTGCAGACATCAAGGAGAGGAAGGCCAAGGCCCAGGGTCCGAAGGAGGACCTGGGAAGCCCTGTCCCCCCACTGAAACCTCTGCGGATTAAGAAGAAGGAGGCATCAGCAGGGGAAGGGACCAAGATGAGAAAGATGAAGAAGAAAGGGTCCGGGGAGGCCGACAAGGACAGCTCAGTGAGCCCGACCAGAGTGAGGAAGAAGACACCGGCAGCCATGTTTCTGGTTGGGGGGGATGACCCTGGGGAAAAAGCTCTGAAGAAGAAAGGCACTCCCAAAGGCTCAGAAGAGGAGAAGGAGGAGGAGGAGGAAGAGGTGGCAGCTGTGGTGACCAAGAACAGCAATCAGAAGGGCAAAGCAAAAGGAAAAGGCAAAAAGAAAACGAAGGAGGAGAGGGCCCCATCCCCACCCGTGGAAGTGGACGAACCCCAGGAGTTTGTGCTTCGGCCTGCCCCCCAGGGCCAGACGGTCCGCTGCCGGCTGACCCGGGACAAGAAGGGCATGGACCGGGGCCTGTATCCCTCCTACTTCCTGCACCTGGACACAGAGAAGAAGGTGTTCCTCCTGGCTGGCAGGAAACGGAAACGGAGCAAGACAGCCAATTACCTCATCTCCAGCGACCCCACCAATCTGTCCCGAGGAGGGGAGAATTTCATTGGGAAGCTGAGGTCCAATCTCCTGGGGAACCGCTTTACCGTCTTTGACAACGGGCAGAACCCGCACCGCGGAGGCAGCACGGATGTGGGGAGCCTTCGGCAGGAGCTGGCGGCTGTGATCTATGAAACCAACGTGCTGGGCTTCCGAGGTCCCCGGCGCATGACGGTCATCATTCCCGGCATGAATTCGGACAAGGAGAGGGTCCCCATTCGGCCCCGCAATGCCAGCGACGGGCTGCTGGTACGCTGGCAGAACAAGACACTGGAGAGCCTCATCGAGCTACACAACAAGCCCCCCGTCTGGAATGATGACAGTGGCTCCTACACCCTCAACTTCCAAGGCCGAGTCACCCAGGCCTCGGTCAAGAACTTCCAGATTGTCCACGCCGATGACCCCGACTACATCGTGCTGCAGTTCGGCCGCGTGGCAGAGGACGCCTTCACCCTAGACTACCGGTACCCGCTGTGCGCCCTGCAGGCCTTCGCCATTGCCCTCTCCAGTTTCGACGGGAAGCTGGCCTGCGAGTGA

Related Sequences

bmy_10975T0 SequenceType object (3)

Length: 587 aa      View alignments
>bmy_10975T0
LEPAGGGGEAEPGLAGARGEASRAAGWPEQGLWIGTGTMPLQDDTLREVWASDSGHEEEGQSPEVQQRTKQRQKLRKKKTEAPESPCPTGSKPRRPGGVRKAEPRGAPQAGRRRSPREEPSREPAEARELQTVYAKFLRDPEAKKRDPRETFLVARAPDAEDGDEEEEEDKEEKEKKEKIRLPPKKPPKEKASADIKERKAKAQGPKEDLGSPVPPLKPLRIKKKEASAGEGTKMRKMKKKGSGEADKDSSVSPTRVRKKTPAAMFLVGGDDPGEKALKKKGTPKGSEEEKEEEEEEVAAVVTKNSNQKGKAKGKGKKKTKEERAPSPPVEVDEPQEFVLRPAPQGQTVRCRLTRDKKGMDRGLYPSYFLHLDTEKKVFLLAGRKRKRSKTANYLISSDPTNLSRGGENFIGKLRSNLLGNRFTVFDNGQNPHRGGSTDVGSLRQELAAVIYETNVLGFRGPRRMTVIIPGMNSDKERVPIRPRNASDGLLVRWQNKTLESLIELHNKPPVWNDDSGSYTLNFQGRVTQASVKNFQIVHADDPDYIVLQFGRVAEDAFTLDYRYPLCALQAFAIALSSFDGKLACE*