Sequence detailsbmy_10998 (Coding sequence)

Part of scaffold_590 (SequenceType object (1))

For more information consult the page for scaffold_590 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COG1ENSTTRG00000005213 (Bottlenosed dolphin)

Gene Details

component of oligomeric golgi complex 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004916, Bottlenosed dolphin)

Protein Percentage 86.8%
cDNA percentage 87.82%
Ka/Ks Ratio 0.29106 (Ka = 0.0244, Ks = 0.0839)

COG1ENSBTAG00000006087 (Cow)

Gene Details

conserved oligomeric Golgi complex subunit 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007999, Cow)

Protein Percentage 87.42%
cDNA percentage 88.25%
Ka/Ks Ratio 0.13954 (Ka = 0.0629, Ks = 0.4509)

COG1 (Minke Whale)

Gene Details

component of oligomeric golgi complex 1

External Links

Gene match (Identifier: BACU011475, Minke Whale)

Protein Percentage 97.77%
cDNA percentage 98.33%
Ka/Ks Ratio 0.3658 (Ka = 0.0118, Ks = 0.0322)

Additional orthologs identified in other species via the OPTIC pipeline.

COG1 (Human)   Cog1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2844 bp    Location:274846..303956   Strand:+
Raw sequence 
>bmy_10998
ATGGCCGCCGGGCGGTACCGCCGGGCGGAAGTGCCCCGTGGGGCGGCTGACGGGTCCATCATGGCGGCCACGGCCGCCTCCACCGCTCTGAAGCGGCTGGATCTGCGGGACCCTGCGGCGCTTTTCGAGAGCCACGGCGCGGAGGAGATTCGCGGGCTGGAGCGCCAGGTTCGGGCCGAGATCGAGCACAAGAAGGAGGAGCTGCGGCAGATGGTGGGCGAGCGGTACCGCGACTTGATCGAGGCGGCCGACACCATCGGCCAGATGCGCCGCTGCGCCGAGGGGCTGGTGGGCGCCGTKAAGGCCACCGACCAGTACTGCGCCCGCCTCCGCCAGGCCGGCTCGGCCGCGCCCCGGCCGCCGCGGGACCCGCAGCCACAGCAGCCGTACCAGGAGAAGTTCTACAGCATGGCTGCCCAGATCAAGCTACTGCTAGAAATTCCTGAGAAGATCTGGAGCTCCATGGAGGCCTCTCAGTATCTCCACGCCACACAGCTCTACCTGCTGTGCTGCCACCTTCACAAGCTGCTCCAGCTGGATTCTTCTAGTTCCCGATACAGCCCTGTCCTCTCCCGATTCCCTATACTCATCCAGCAGCTGGCGGCGGCCAGCCACTTCCGGTCAGCCATCCTGCATGAGAGCAAGATGCTGCTCACATGCCAAGCCGTGTCCGACCAAGCTGTGGCCGAGGCCCTGTGCTCTGTGATGCTCTTAGAAGAGAGCTCTCCGCGCCAAGCCCTAGCGGACTTCCTGCTGGCCAGAAAGGCAGCTATTCAGAAACTGCTCAACCAGCAGCACCACGGAAAGGGCATTGGTGTTCTGCAGGAGGACATGAAGCTGTGCAGCTGGTTCAAACACCTGCCCGCGTCCGTCGTCGAGTTCCAGCCGGCTCTCCGGACGCTTGCGCGTCCCATCAGCCAGGAGTACCTGAAAGACACGCTGCAGAAGTGGATCCACATGTGTAATGAAGACATTAAAAATGGGATCAGCGACCTGCTTATGTACGTGACGAACATGAAAGGTCTCGCGGCGATCCGGGATGCCATGTGGGAGTTACTTGCCAACGAGTCGATCCATCACAGCTGGGATGTGATCTGTCGGCGGCTTCTGGACAGGCCTCTCTTGTTCTGGGAGGATTTGATGCAGCAGCTGTTCCTTGACCGACTGCAGACTCTGACAAAAGAAGGCTTTGACTCCATCTCCAGTAGTTCCAAAGAGCTCCTCATTTCAGCCTTGCGGGAACTTGAAAGTAGCACCAGCAGCTCCACTTCAAACAAGCACATCCACTTTGAGCACAACATGTCTCTCTTCCTCTGGTCCGAGAGCCCCAGCGACCTGCCTCCCGACGCTGCCTGGGTCAGCGTGTCGAACCGGGCTCAATTTCCGGGCAGTGGGCTCTCCATGAAAGCAAAAGCCGTTAGCCCTTGTGTACAGAGCTTCTGTTCTGCCCTAGATTCGAAACTGAAGGTGAAACTGGAGGACCTCCTGGCTTACCTTCCCTCTGGCGACCCGTCACCCCCCAAGGATGTCTCCCCCGCGCGAGCCAGGCACTGTGCCTTTGACAGATACGCAGACGCGGGGACCGTGCAGGAGATGCTGCAGATGCACTCCGCGGCCTGTGTCAGGCGCATCACGGACTGCGTCCGGGCGGAGCTGCAGAGCGCCCAGCAGGCTATACAAGGGCAGCAGGACGCTCTCGACGGGGTCCAGCTACACTCGGTCCTCTTCATGGCCAGACTCTGCCAGTCACTGGGAGAGCTGTGTCCCCACCTGAAGCAGTGTATCTTGGGAAAATCAGGGAGCACCGAGAAACCAGCAAGGGATTCTAGGGCTCTGAAGAAACAGGGGAAGGGCAAAACTCAGGAAATAATTCCCATGCAGGCCAAGTGGCAGGAAGTGAAGGAGCTCCTCCTACAGCAGAGCGTGATGGGCTACCGGGTCTGGAGCTCGGCGGTTGTGAAAGTTCTGGCTCATGGATTCACCCAGTCATTACTTTTAGATGATGCTGGCTCAGTCCTGGCCACGGCCACCAGCTGGGATGAAGTAGAAATCCAGGAGGAAGCAGAGTCTGGCAGCAGCGTCACGTCCAAGATCCGACTGCCTGTCCAGCCGTCCTGGTATGTACAGTCCTTCCTGTTGAGCTTATGCCAGGAAATTAATCGGGTTGGAGGCCATGCCTTGCCCAAGGTGACGCTGCAGGAGATGCTGAAAAGCTGTCTGGTTCAAGTAGTAGCTGCCTATGAGAAACTCTCAGAAGAAAAACAGGTGAAGAAAGAAGGTGCATTTCCAATGACCCAGAATCGGGCACTGCAGCTGCTTTACGATCTGCGTTATCTCCACATCGTTCTGACGACCAAGGGTGAAGAGGTGAAAAGTGGCCGCAGCAAACAGGACCCCAGAGTTGAGAAAGTGGCTGACTACCTTGAAGCGCTCATTGACCCGTTTGACCTGGACGTTTTCACACCGCACCTCCACGGCAACCTCAACCGCCTGGTGCAGCGGACTTCTGTTCTCTTTGGACTGCTGACGGGTACAGAGAATCAGTTCACCCCCAGGAGCAGTACGTTCAACTCCCAGGAAGCCCATAACATACTGCCTCTAGCATCAAGTCAGATCAGGTTTGGACTTCTTCCACTGAGCATGACAAGCACTCGAAAGGCCAAATCAGCCGGCAGAAGCGTCGAAACCAGAGCCCAGCGGCAGGCTGCTGTCCCCCCGGCGCTCTCCCGAGCCGACGACCCGACGCACGCTGGCTCCTTGTTCAGACAGCTTGTCACCGAGGAGGAAGACTCGTCTGCGCCCTCACTGTTCAAACTTGGGTGGCTCTCTAGTATGACCAAGTGA

Related Sequences

bmy_10998T0 SequenceType object (3)

Length: 948 aa      View alignments
>bmy_10998T0
MAAGRYRRAEVPRGAADGSIMAATAASTALKRLDLRDPAALFESHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAEGLVGAVKATDQYCARLRQAGSAAPRPPRDPQPQQPYQEKFYSMAAQIKLLLEIPEKIWSSMEASQYLHATQLYLLCCHLHKLLQLDSSSSRYSPVLSRFPILIQQLAAASHFRSAILHESKMLLTCQAVSDQAVAEALCSVMLLEESSPRQALADFLLARKAAIQKLLNQQHHGKGIGVLQEDMKLCSWFKHLPASVVEFQPALRTLARPISQEYLKDTLQKWIHMCNEDIKNGISDLLMYVTNMKGLAAIRDAMWELLANESIHHSWDVICRRLLDRPLLFWEDLMQQLFLDRLQTLTKEGFDSISSSSKELLISALRELESSTSSSTSNKHIHFEHNMSLFLWSESPSDLPPDAAWVSVSNRAQFPGSGLSMKAKAVSPCVQSFCSALDSKLKVKLEDLLAYLPSGDPSPPKDVSPARARHCAFDRYADAGTVQEMLQMHSAACVRRITDCVRAELQSAQQAIQGQQDALDGVQLHSVLFMARLCQSLGELCPHLKQCILGKSGSTEKPARDSRALKKQGKGKTQEIIPMQAKWQEVKELLLQQSVMGYRVWSSAVVKVLAHGFTQSLLLDDAGSVLATATSWDEVEIQEEAESGSSVTSKIRLPVQPSWYVQSFLLSLCQEINRVGGHALPKVTLQEMLKSCLVQVVAAYEKLSEEKQVKKEGAFPMTQNRALQLLYDLRYLHIVLTTKGEEVKSGRSKQDPRVEKVADYLEALIDPFDLDVFTPHLHGNLNRLVQRTSVLFGLLTGTENQFTPRSSTFNSQEAHNILPLASSQIRFGLLPLSMTSTRKAKSAGRSVETRAQRQAAVPPALSRADDPTHAGSLFRQLVTEEEDSSAPSLFKLGWLSSMTK*