Part of scaffold_590 (Scaffold)

For more information consult the page for scaffold_590 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDC42EP4 ENSBTAG00000019115 (Cow)

Gene Details

cdc42 effector protein 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025446, Cow)

Protein Percentage 86.59%
cDNA percentage 88.82%
Ka/Ks Ratio 0.08902 (Ka = 0.0608, Ks = 0.6834)

CDC42EP4  (Minke Whale)

Gene Details

CDC42 effector protein (Rho GTPase binding) 4

External Links

Gene match (Identifier: BACU011477, Minke Whale)

Protein Percentage 98.03%
cDNA percentage 98.31%
Ka/Ks Ratio 0.08804 (Ka = 0.0076, Ks = 0.0868)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1071 bp    Location:352309..351239   Strand:-
>bmy_11003
ATGCCGATCCTGAAGCAGCTGGTGTCCAGCTCCGTGCACTCCAAGCGCCGCTCCCGAGTGGACCTCACGGCCGAGATGATCAGTGCCCCGCTGGGCGACTTCCGCCACACCATGCACGTGGGCCGGGCGGGGGACGCCTTTGGGGACACCTCCTTCCTCAACAGCAAGGCTGGGGAGCTGGACAGCGAGTCCGTGGACGAGCAGGCCGCCGCCTCCTCGTCCTCCAAACGCGGCCTCCTGGCCCGCAAGTTCCGGGGCAGCAAGCGGTCACAGTCAGTGAGCAGGGGGGACCCGGAACAGAGGGACGTGCTGGGCCCCCTGCGGGACTCGGCCCTGTCCGTCAAGAATGCCATGTCCCTGCCTCAGCTGAACGAGAAGGAGGCCGCCGAGAAGGGCTCCAGCAAGCTGCCCAAGAGCCTGTCCTCCAGCCCCGTGAGGAAGGCCAGCGGGGAGGGCGGCCCGGAGGAGGCGGTGCCTCGGCGGAATGGGGCCTCCGCCCCCCACTCCCCAGACCCCCTCCTCGACGAGCAGGCCTTCGGGGACCTGGCGGATCTGCCCGTGGTTCCCAAGGCCAGCTTCGGGCTGAAGCACGCCGAGTCCATCATGTCCTTCCACATCGACCTGGGGCCCTCCATGCTGGGCGACGTCCTCAGCATCATGGACAAGGCCGAGTGGGAACCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTCGGTTACCATGGTGACGAGGACCCAGCAGGCAGCCCCGCCCACGCTCCCCCGACGGTGGCGGCAGCCCCTCCCCTGGCAAGGCAGGAAGGCGCGGGGGGCCCGGACCTGCCCGCGCTGCCCTCCCGCGCCCTGCAGGAGGAGGGCTGGGCGGCGGTGGCCCCCAGCCCCGGCTCGGCCCGCAGCGTGGGCAGCCACACCACACGGGACAGCAGCTCCCTGTCCAGCTGCACCTCGGGGGTCCTGGAGGAGCGCAGCCCCGCCTCCCGGGGGCCGGACCGGGCCCGGGCCACTCTCCCGAGGCAGCCGGACCCCGAGTTCTCCTTCATGGACGAGGAGGAGGAGGACGAGATCCGGGTGTGA

Related Sequences

bmy_11003T0 Protein

Length: 357 aa      View alignments
>bmy_11003T0
MPILKQLVSSSVHSKRRSRVDLTAEMISAPLGDFRHTMHVGRAGDAFGDTSFLNSKAGELDSESVDEQAAASSSSKRGLLARKFRGSKRSQSVSRGDPEQRDVLGPLRDSALSVKNAMSLPQLNEKEAAEKGSSKLPKSLSSSPVRKASGEGGPEEAVPRRNGASAPHSPDPLLDEQAFGDLADLPVVPKASFGLKHAESIMSFHIDLGPSMLGDVLSIMDKAEWEPEEEEEEEEEVGYHGDEDPAGSPAHAPPTVAAAPPLARQEGAGGPDLPALPSRALQEEGWAAVAPSPGSARSVGSHTTRDSSSLSSCTSGVLEERSPASRGPDRARATLPRQPDPEFSFMDEEEEDEIRV*