Sequence detailsbmy_11028 (Coding sequence)

Part of scaffold_600 (SequenceType object (1))

For more information consult the page for scaffold_600 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GJA3ENSBTAG00000020400 (Cow)

Gene Details

Gap junction alpha-3 protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000027188, Cow)

Protein Percentage 87.68%
cDNA percentage 90.15%
Ka/Ks Ratio 0.10028 (Ka = 0.0579, Ks = 0.5778)

GJA3 (Minke Whale)

Gene Details

gap junction protein, alpha 3, 46kDa

External Links

Gene match (Identifier: BACU000171, Minke Whale)

Protein Percentage 70.0%
cDNA percentage 69.43%
Ka/Ks Ratio 0.03746 (Ka = 0.0039, Ks = 0.105)

Additional orthologs identified in other species via the OPTIC pipeline.

GJA3 (Human)   Gja3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1233 bp    Location:752907..751675   Strand:-
Raw sequence 
>bmy_11028
ATGGGCGACTGGAGCTTCCTGGGGAGACTCCTAGAGAACGCCCAGGAGCACTCCACCGTCATCGGCAAGGTCTGGCTGACGGTGCTGTTCATCTTCAGGATCCTGGTGCTGGGGGCCGCGGCCGAGGAGGTCTGGGGGGACGAGCAGTCAGACTTCACGTGCAACACGCAGCAGCCGGGCTGCGAGAACGTGTGCTACGACCGCGCCTTCCCCATCTCGCACGTGCGCTTCTGGGTGCTGCAGATCATCTTCGTGTCCACGCCCACCCTCATCTACCTGGGCCACGTGCTGCACCTGGTGCGCATGGAGGAGAAGAGGAAGGAGCGGGAGGAGGAGCGGCTGAAGACCGACGGCGCGGCCCCCGGGCAGGACAGGCCCCCGGTGCGCGACGACCGCGGCAAGGTCCGCCTGGCCGGCGCCCTGCTCCGCACCTACGTCTTCAACATCATCTTCAAGACGTTGTTCGAGGTGGGCTTCATCGCCGGGCAGTACTTCCTGTACGGCTTCCAGCTGAAGCCGCTGTACCGCTGTGACCGGTGGCCCTGCCCTAACACGGTGGACTGCTTCATCTCGCGGCCCACGGAGAAGACCATCTTCATCCTCTTCATGCTGGCCGTGGCCTGCGTGTCCCTCTTGCTCAACATGCTGGAGATCTACCACCTGGGCTGGAAGAAGCTGAAACAGGGCATGACCGACCCCTACCCCCCGGACACTCCCGGCTCCAGCGTGAGGGCCGCAAAGCCTGGGTGTGGGAGCCCCCTCCTGCTGCCCTCCCACTCCAACCCGCCCGCCCTCACCGTCGGGTTCCCGCCCTACTATGCGCCCTCGGCCTCTTCCCTGGGGCAGGCGTCGGCCCCAGGCTACCCCGAGCCCCCTCCGCCGGCGGCCCTGCCCGGGACCCCCGGCGAGGGCCACCCGGCCGGCTCCCCCGGCGGCCACCAGCACCTGCTCGCGACGGCGCCGAACTGGGCCGACCGGGAGGCCGAGCAGCAGACTTCGGCCGGGAAGGCCTCCCCGCCGGCGTCCGCTCCCGCAGCCCCGAAGCCCCCGGCCGGCCCCCAGCAGCCCCCTCCGGAGGGCGGGGCGGGGAGCTCGGGCGACAGCGACGGGGAGGGGGCGGTGACGGCCGTGGAGCTGCACGCGCCCCCCGAGCTCCCCGCAGACCCCGGCCGGTCCAGCAAGGCCAGTAAGTCCAGCGGCGGCCGGGCCAGGGCCAGTGACTTGGCCATCTAG

Related Sequences

bmy_11028T0 SequenceType object (3)

Length: 411 aa      View alignments
>bmy_11028T0
MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEEVWGDEQSDFTCNTQQPGCENVCYDRAFPISHVRFWVLQIIFVSTPTLIYLGHVLHLVRMEEKRKEREEERLKTDGAAPGQDRPPVRDDRGKVRLAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGFQLKPLYRCDRWPCPNTVDCFISRPTEKTIFILFMLAVACVSLLLNMLEIYHLGWKKLKQGMTDPYPPDTPGSSVRAAKPGCGSPLLLPSHSNPPALTVGFPPYYAPSASSLGQASAPGYPEPPPPAALPGTPGEGHPAGSPGGHQHLLATAPNWADREAEQQTSAGKASPPASAPAAPKPPAGPQQPPPEGGAGSSGDSDGEGAVTAVELHAPPELPADPGRSSKASKSSGGRARASDLAI*