Part of scaffold_614 (Scaffold)

For more information consult the page for scaffold_614 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NPAS2 ENSTTRG00000016446 (Bottlenosed dolphin)

Gene Details

neuronal PAS domain protein 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015590, Bottlenosed dolphin)

Protein Percentage 74.15%
cDNA percentage 77.4%
Ka/Ks Ratio 0.6177 (Ka = 0.1678, Ks = 0.2717)

BT.55456 ENSBTAG00000019697 (Cow)

Gene Details

neuronal PAS domain-containing protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026257, Cow)

Protein Percentage 82.86%
cDNA percentage 85.28%
Ka/Ks Ratio 0.2059 (Ka = 0.0998, Ks = 0.4848)

NPAS2  (Minke Whale)

Gene Details

neuronal PAS domain protein 2

External Links

Gene match (Identifier: BACU017681, Minke Whale)

Protein Percentage 89.35%
cDNA percentage 92.81%
Ka/Ks Ratio 0.63883 (Ka = 0.0689, Ks = 0.1078)

Genome Location

Sequence Coding sequence

Length: 1290 bp    Location:469968..497724   Strand:+
>bmy_11056
ATGTGCGGACTCCGTCTTCTCTTCACAGTGATGCAGTTTGGCAAAGGCAAGTCGTGTTGCTACCGGTTTCTGACAAAAGGCCAGCAGTGGATTTGGCTGCAGACTCACTACTACATCACCTACCACCAGTGGAACTCCAAGCCCGAGTTCATCGTGTGCACGCACTCAGTGGTCAGGTCCCCCCTCCAGCTGTGGTCTCTTGATTTCCTGAGCAGTTACGCGGAGGTCCGGGTGGAAAGAAGGCAAGAGCTGGCCCTGGAGGACCCGCTTCTGGAGACCGTCCACCCTTCGGCACTGAAGCACAAGGGCTCCAGCCTGGAAGCTCAGCAGCACTTTAATGCACTCGACGTGGGCGCCTCGGGCCTTAACACCAGCCACTCACCATCGGCGTCCTCAAGAAGTTCCCACAAATCCTCGCGCACGGCTGTGTCCGAACCCACCTGTGATGTGTTTCTTGCAGCTACTCCAAGCAAGCTGAGGGCAGAGGCCGGCACCACGGCTTTGCCAAGATCGGCTCAAGAGCTCCCCGTGCTAGGGCTCAGCCAGGCAGCCACGATGCCGGCTCCCCTGCCCACCCCGGCGTCCTGTGACATCACACAGCAGCTCCTGCCTCAGACCATCTTGCAAAGCCCACCTGCCCCCGTGACACAGGTGAGTCTGGGACTCAGGGCAAGGGAAACCAGGGGCGGCACTTCCCYGAGACAGGATGCTGGGGTCCTCTGGAGGTTTTCAGCACAGCTCAGCATGTTCCAGACCATCAAAGACCAGCTGGAGCAGAGGACGAGGATCCTGCAAGCCAACATCCGGTGGCAGCAGGAAGAGCTCCACAAGATCCAGGAGCAGCTCTGCCTGGTCCAGGACTCCAACGTCCAGGCTATTGCTGAGCCAGCCCATTCAGCCCATGATGCCCGGGTCCTGCGACGCGAGGCAGCCCCCAGAGGTCGGCAGGCCTGGACGACAAGTCAAAGCCAGGCCGTGTGTCCAAACCCAGACGTGCACACCACCACCAGCAGCGTCTCGACCCCTGTCCTGCTGATGGGGCTTCACCCCCGCTTCCCCACCTCCCAGCCGTCGCCCCTGAAGCCCGCGCAGACCCAGCAGCAGCCTCCGTGCTTCCTGCAGGTGCAGGCACCAACCTCTTTGCACAGTGAGCCGCAGGACTCGCTCCTTCTCTCCACCTACTCGCAGCAGCCAGGGACCCTGGGCTACCCACCTCCCGCACCCTCGCGCCCTCCCCGAAGGGTCAGCAGCCTGTCTGAGTCCGCAGGCCTCCAGCAGCTACCGCGGTAG

Related Sequences

bmy_11056T0 Protein

Length: 430 aa      View alignments
>bmy_11056T0
MCGLRLLFTVMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVRSPLQLWSLDFLSSYAEVRVERRQELALEDPLLETVHPSALKHKGSSLEAQQHFNALDVGASGLNTSHSPSASSRSSHKSSRTAVSEPTCDVFLAATPSKLRAEAGTTALPRSAQELPVLGLSQAATMPAPLPTPASCDITQQLLPQTILQSPPAPVTQVSLGLRARETRGGTSXRQDAGVLWRFSAQLSMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLCLVQDSNVQAIAEPAHSAHDARVLRREAAPRGRQAWTTSQSQAVCPNPDVHTTTSSVSTPVLLMGLHPRFPTSQPSPLKPAQTQQQPPCFLQVQAPTSLHSEPQDSLLLSTYSQQPGTLGYPPPAPSRPPRRVSSLSESAGLQQLPR*