Part of scaffold_589 (Scaffold)

For more information consult the page for scaffold_589 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TBCCD1 ENSTTRG00000016829 (Bottlenosed dolphin)

Gene Details

TBCC domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015956, Bottlenosed dolphin)

Protein Percentage 89.35%
cDNA percentage 89.71%
Ka/Ks Ratio 0.4189 (Ka = 0.0087, Ks = 0.0207)

BT.18678 ENSBTAG00000003143 (Cow)

Gene Details

TBCC domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004087, Cow)

Protein Percentage 95.51%
cDNA percentage 94.25%
Ka/Ks Ratio 0.14599 (Ka = 0.0224, Ks = 0.1538)

TBCCD1  (Minke Whale)

Gene Details

TBCC domain containing 1

External Links

Gene match (Identifier: BACU016548, Minke Whale)

Protein Percentage 91.51%
cDNA percentage 93.12%
Ka/Ks Ratio 0.60584 (Ka = 0.0627, Ks = 0.1036)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1674 bp    Location:763215..743234   Strand:-
>bmy_11075
ATGGATCAGTCCGGAGTTCTCCTCTGGGTGAAAGCAGAACCCTTTATAGTGGGCGCCTTGCAGGTCCCCCCTCCATCCAAGTTCAGTCTTCACTATCTCAGGAAGATATCCACCTATGTGCGAACCCGGGCCACAGAGGGAGGTTACCCACGCCTGTCCTGGTCTACATGGAGGCACATTGCRTGTGGAAAGCTGCAGTTGGCTAAGGATCTGGCATGGCTTTACTTTGAAATATTTGATAGTCTTGCAGTGAAGACACCGAAGGAGCGCCTGGAATGGTCTGAGATTCTGTCCAACTGCATGTCTGAGGATGAAGTCGAAAAGCAAAGAAATCAGCTTTCAGTGGACACCCTACAGTTTCTGCTCTTCTTATATATACAACAGTTAAACAAGGTCTCCCTGAGGACATCTTTGATTGGAGAAGAGTGGCCTAGTCCCAGACACAGATCKCAGTCTCCTGACCTGACTGAAAAATCCAGTTGTCATAATAAGAACTGGAATGATTACAGTCACCAAGCTTTTGTCTGTGATCATCTGTCAGATCTCCTTGAACTGCTTGTAGATCCAGAACAACTCACTGCATCATTTCATTCGACCCATAGTAGTCTAGTCTCTCGAGAAGCTGTTGTAGCACTCAGCTTTCTTATTGAAGGTACAGTGAGTGGAGCCAGGAAGATATATCCACTTTATGAACTTGCACTGTGGCAACCACTGCATGCAGAAAGTGGCTTCTCAAAGACCTCTAAGGCCTTTTCTTTCTACAAGCTGGAAGCCTGGTTGAGAGCCTGTTTAACTGAGAATCCATTTGGTACATCTGCTTGCCTCAAGTCTGGGAAGAAATTGGCTTGGGCTCACCAAGTTGAAGGGACGACCAAAAGAGCTAAGATTGCTTGTAATACTCACGTGGCCCCTAGGATGCACCGCCTGGTGGTGATGAGCCAGGTTTACAAGCAGACATTGGCCAAGAGCTCAGATACTCTGGTGGGGGCACATGTAAAGATTCATCGTTGCAACGAGACTTTTGTATATCTGCTGTCTCCCTTACGATCTGTGACAATTGAGAAGTGCAGGAATAGCACCTTCATCCTGGGCCCTGTACAGACTGCTCTTCATCTCCACAGCTGTGACAATGTTAAAGTCATTGCTGTTTGCCATCGTCTGTCCATCTCTTCTACAACAGGTTGCATCTTTCACATTCTGACGCCTACACGCCCACTTATTCTCTCTGGGAACCAGAGAGTAACTTTTGCCCCCTTTCATACCCATTACCCAATGCTGGAGGACCACATGGCCAGGACTGGCCTTGCTACAGTGCCTAACTATTGGGATAATCCCATAATTGTGTGCAGAGAGAACAGCAGCACAAGTGTCTTCCGACTCTTAGCACCGTGTGAATTCTATGTGTTTATTATTCCCTTTGAAATGGAAGGGGACACAACAGAGATACCTGGGGGTCTTCCATCTGCATATCAGAAAGCACTGGGCCAAAGAGAGAAAAAGATACAGACCTGGCAGAAAACTGTGAAGGAGGCTCGTTTGACAAAGGATCAAAGGAAGCAGTTCCAGGTACTTGTGGAAAACAAGTTTTATGAGTGGTTGATTAATACAGGACATCGTCAGCAGCTGGACAGTCTTGTGCCCCCTGCAGCAGGCTCCAAACAAGCAGCAGGATAA

Related Sequences

bmy_11075T0 Protein

Length: 558 aa      View alignments
>bmy_11075T0
MDQSGVLLWVKAEPFIVGALQVPPPSKFSLHYLRKISTYVRTRATEGGYPRLSWSTWRHIACGKLQLAKDLAWLYFEIFDSLAVKTPKERLEWSEILSNCMSEDEVEKQRNQLSVDTLQFLLFLYIQQLNKVSLRTSLIGEEWPSPRHRSQSPDLTEKSSCHNKNWNDYSHQAFVCDHLSDLLELLVDPEQLTASFHSTHSSLVSREAVVALSFLIEGTVSGARKIYPLYELALWQPLHAESGFSKTSKAFSFYKLEAWLRACLTENPFGTSACLKSGKKLAWAHQVEGTTKRAKIACNTHVAPRMHRLVVMSQVYKQTLAKSSDTLVGAHVKIHRCNETFVYLLSPLRSVTIEKCRNSTFILGPVQTALHLHSCDNVKVIAVCHRLSISSTTGCIFHILTPTRPLILSGNQRVTFAPFHTHYPMLEDHMARTGLATVPNYWDNPIIVCRENSSTSVFRLLAPCEFYVFIIPFEMEGDTTEIPGGLPSAYQKALGQREKKIQTWQKTVKEARLTKDQRKQFQVLVENKFYEWLINTGHRQQLDSLVPPAAGSKQAAG*