Part of scaffold_589 (Scaffold)

For more information consult the page for scaffold_589 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RFC4 ENSTTRG00000016836 (Bottlenosed dolphin)

Gene Details

replication factor C (activator 1) 4, 37kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015963, Bottlenosed dolphin)

Protein Percentage 98.73%
cDNA percentage 98.84%
Ka/Ks Ratio 0.26889 (Ka = 0.0071, Ks = 0.0265)

RFC4 ENSBTAG00000014727 (Cow)

Gene Details

replication factor C subunit 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043171, Cow)

Protein Percentage 94.81%
cDNA percentage 95.04%
Ka/Ks Ratio 0.15395 (Ka = 0.0236, Ks = 0.1533)

RFC4  (Minke Whale)

Gene Details

replication factor C (activator 1) 4, 37kDa

External Links

Gene match (Identifier: BACU016542, Minke Whale)

Protein Percentage 98.73%
cDNA percentage 98.63%
Ka/Ks Ratio 0.21064 (Ka = 0.0072, Ks = 0.0342)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 951 bp    Location:972992..960236   Strand:-
>bmy_11084
ATGCAGGCATTTCTAAAAGGCACATCTATCAGCAGTAAACCACCATTGACTAAGGATCGAGGAGTAGCTGCCACTGCCAGAAGTAGTGGAGAGAACAAGAAAGCCAAACCTGTTCCGTGGGTGGAAAAATATCGCCCAAAATATGTGGATGAAGTTGCTTTCCAGGAAGAAGTGGTTGCAGTGCTAAAAAAGTCTTTAGAAGGAGCTGATCTCCCTAATCTCTTGTTTTACGGGCCACCTGGAACTGGAAAAACATCCACTATTTTGGCAGCAGCTAGGGAACTCTTTGGGCCTGAACTTTTTCGATTAAGAGTTCTTGAGTTAAATGCATCTGATGAACGTGGAATACAAGTAGTTAGAGAGAAAGTGAAGAATTTTGCCCAATTAACTGTGACAGGAAGCCGTTCAGAAATAATTGAACCTCTGACCTCTAGATGTTCTAAATTCCGCTTCAAACCTCTGTCAGATAAAATTCAACAGCAGCGATTACTAGACATCGCTGATAAAGAACATATCAAAATTAGCAATGAGGGACTAGCTCATCTTGTTAAAGTGTCAGAAGGAGACTTAAGGAAAGCCATTACATTTCTTCAAAGTGCTACTCGATTAACAGGTGGAAAGGAGGTCACAGGAAAGGTGATCACAGACATTGCTGGGGTAATACCAGCTGAAACAATTGATGGAGTATTTGCTGCATGTCAGAGTGGCTCTTTTGACAAACTAGAAGCTGTGGTAAAGGACTTAATAGATGAGGGTCATGCAGCAACTCAGCTTGTAAATCAACTTCATGATGGGGTTGTAGAAAATGATAACCTTTCTGATAAACAGAAGTCTGTTATTACAGAAAAACTTGCTGAAGTTGATAAATGCTTAGCAGATGGTGCTGATGAACATCTACAGCTGATCAGCCTCTGTGCAACTGTCATGCAGCAGTTAACTCAGAACTGTTAA

Related Sequences

bmy_11084T0 Protein

Length: 317 aa      View alignments
>bmy_11084T0
MQAFLKGTSISSKPPLTKDRGVAATARSSGENKKAKPVPWVEKYRPKYVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVTGSRSEIIEPLTSRCSKFRFKPLSDKIQQQRLLDIADKEHIKISNEGLAHLVKVSEGDLRKAITFLQSATRLTGGKEVTGKVITDIAGVIPAETIDGVFAACQSGSFDKLEAVVKDLIDEGHAATQLVNQLHDGVVENDNLSDKQKSVITEKLAEVDKCLADGADEHLQLISLCATVMQQLTQNC*