Sequence detailsbmy_11100 (Coding sequence)

Part of scaffold_607 (SequenceType object (1))

For more information consult the page for scaffold_607 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BCMO1ENSTTRG00000006783 (Bottlenosed dolphin)

Gene Details

beta-carotene 15,15'-monooxygenase 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000006415, Bottlenosed dolphin)

Protein Percentage 88.15%
cDNA percentage 89.74%
Ka/Ks Ratio 0.40051 (Ka = 0.0861, Ks = 0.2149)

BCMO1ENSBTAG00000001026 (Cow)

Gene Details

beta,beta-carotene 15,15'-monooxygenase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000045735, Cow)

Protein Percentage 76.79%
cDNA percentage 80.52%
Ka/Ks Ratio 0.29371 (Ka = 0.1649, Ks = 0.5615)

Additional orthologs identified in other species via the OPTIC pipeline.

BCMO1 (Human)   Bcmo1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1623 bp    Location:421024..459414   Strand:+
Raw sequence 
>bmy_11100
GCAGCTTCCTGCCGCCGTGTGCACGAAGAGATCCCAGGCCCTCGGAGAGCGGAAAGCAAGTGGAGAAAGGAGTGGCATCAGAAGGGAAGGAGATGTAAAGGAAGCTGCAGGCGAGCAGGACGGGAAGACAAGGAGGGGCCAGGAGCAGTCGCCTTGAACACAGAGGAGCGCAGGATTCCAGCATGGCTGCAGGGGACCCTGCTCCGCAATGGGCCTGGGATGCACACAGTGGGTGAAGTCTATTACAGGAGCAAATACCTGAGAAGTGATACCTACACTGCCAATATTGAAGCGAACAGGATTGTGGTGTCAGAATTTGGAACAATGGCCTATCCGGACCCCTGCAAAAACATATTTTCCAAAGCTTTCTCCTACCTGTCCCACACCATCCCTGATTTCACAGACAACTGTCTGATCAACATCATGAAGTGTGGAGAAGACTTCTATGCAACCACGGAGACCAATTACATCAGGAAAATCAACCCCCAGACTCTGGAAACCCTGGAGAAGGTTGATTATCGTAAACACGTGGCTGTAAATCTGGCGACATCACATCCTCATTATGATGACGCTGGAAATGTTCTCAACATTGGCACGTCCATCGTGGACAAGGGGAAGACAAAATATGTGATCTTTAAGATCCCTGCCACAGTATCAGAGGGCGGGAAGAAGGGGCTGAGCCCCCTGAAACACATGGAGGTGTTCTGCTCCATCGCCTCCCGCGCGCTCCTCTCCCCGAGCTATTACCACAGCTTCGGAGTCACCGAGAGCTACATCGTTTTCCTCGAGCAGCCTTTCAAGATGGATATCCTCAAGATGGCAACCGCCTACATCCGGGGCGTGAGCTGGGCTTCCTGCCTGGCTTTCCACAGGGAGGACAAGACTTACATTCACATCATTGACCAAAGGACGAGGAAGCCCGTGCTGACCAAATTTTACACGGACCCCATGGTGGTGTTTCATCACGTCAACGCCTACGAAGAGGACGGCTGCCTTCTGTTCGACGTCATTGCCTACGAGGACAGCAGCCTTTACCAGCTCTTCTACTTGGCCAACCTGAACAAGGACTTCGAGGAGAACTCCAGGCTCACCTCCGTCCCAGCCCTCAAGAGGTTCGCAGTGCCCCTTCACGTGGACAAGGAAAAAGAGGACCAAGTCTACTGCCAGCCGGAGTTGCTTTATGAAGGCTTAGAGCTGCCTCGGATCAATTACGCTCACAACGGGAAGCGATACCGCTATGTCTTTGCTGCTGAAGTCCAGTGGAGCCCCATCCCAACCAAGATAATAAAATACGACATTCTCACGAAGTCGTCCTTGAAGTGGGGAGAGGCGCACTGCTGGCCGGCGGAGCCGGTGTTCGTGCCCACACCGGGTGCCGAGGACGAGGATCACGGGATTATCTTATCAGCCATTGTCTCTACTGATCCCCAGAAGCTGCCTTTTCTGCTGGTTCTGGATGCCAAAACTTTTACAGAATTGGCTCGTGCCTCCGTTGATGTAGACATGCACCTGGATCTCCACGGGCTGTTCATCCCAGGTGCCAACTGGGATGCAGGGAAGCAGGCCCCTTCCTGGGAGGAGCAGGACAGGGCTGCTGAGCGCCGTGTGGCCCCAAGGACCTGA

Related Sequences

bmy_11100T0 SequenceType object (3)

Length: 541 aa      View alignments
>bmy_11100T0
AASCRRVHEEIPGPRRAESKWRKEWHQKGRRCKGSCRRAGREDKEGPGAVALNTEERRIPAWLQGTLLRNGPGMHTVGEVYYRSKYLRSDTYTANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLINIMKCGEDFYATTETNYIRKINPQTLETLEKVDYRKHVAVNLATSHPHYDDAGNVLNIGTSIVDKGKTKYVIFKIPATVSEGGKKGLSPLKHMEVFCSIASRALLSPSYYHSFGVTESYIVFLEQPFKMDILKMATAYIRGVSWASCLAFHREDKTYIHIIDQRTRKPVLTKFYTDPMVVFHHVNAYEEDGCLLFDVIAYEDSSLYQLFYLANLNKDFEENSRLTSVPALKRFAVPLHVDKEKEDQVYCQPELLYEGLELPRINYAHNGKRYRYVFAAEVQWSPIPTKIIKYDILTKSSLKWGEAHCWPAEPVFVPTPGAEDEDHGIILSAIVSTDPQKLPFLLVLDAKTFTELARASVDVDMHLDLHGLFIPGANWDAGKQAPSWEEQDRAAERRVAPRT*