Part of scaffold_599 (Scaffold)

For more information consult the page for scaffold_599 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRDM11 ENSTTRG00000002317 (Bottlenosed dolphin)

Gene Details

PR domain containing 11

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002171, Bottlenosed dolphin)

Protein Percentage 82.12%
cDNA percentage 82.45%
Ka/Ks Ratio 0.19797 (Ka = 0.0108, Ks = 0.0546)

PRDM11 ENSBTAG00000006443 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008450, Cow)

Protein Percentage 91.36%
cDNA percentage 91.81%
Ka/Ks Ratio 0.19639 (Ka = 0.0497, Ks = 0.2529)

PRDM11  (Minke Whale)

Gene Details

PR domain containing 11

External Links

Gene match (Identifier: BACU018609, Minke Whale)

Protein Percentage 96.36%
cDNA percentage 97.13%
Ka/Ks Ratio 0.66922 (Ka = 0.0252, Ks = 0.0376)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1065 bp    Location:710997..716890   Strand:+
>bmy_11108
ATGTTGCATCATCTCACCTTTTGGAGGTACGTGGTCATCTCTCGGGAGGAGAGGGAGCAGAACCTGCTGGCGTTCCAGCACAGCGAGTGCATCTACTTCCGGGCGTGCCGGGACATCCGGCCCGGGGAGCGGCTGCGGGTCTGGTACAGCGAGGACTACATGAAGCGCCTGCACAGCATGTCCCAAGAGACCATCCACCGCAACCTGGCCAGAGGAGAGAAGAAGTTGCAGAGGGAGAAGTCTGAGCAGGCTCTGGATAACCCAGAAGACCTGAGGGGTCCCCTGCAGCTCCCCGTGTTGAGACAGGGCAAAAGTCCCTACAAGCGTGGCTTTGACGAGGGGGACGTGCACCCCCAGGCCAAGAAGAAGAAAATCGACCTCATTTTCAAGGATGTGTTGGAGGCCTCGCTGGAATCTGCAAAGGTAGAAGCCCACCAGCTGGCACTGAGCACCTCGCTGGTCATCAGGAAGGTCCCCAAGTACCAGAACGACGCCTACAGTCAGTGTGCAATGACTGTGTCACATGGCSTGCAGAATGTCAGCCGGACCCAGGGGGAAGGAGACTGGAAGATCCCCCAAGGGGCTTCCAAGGAGGCAGGCCCAGTGGAGGACGAAGAGGAGGAGCCTTCGTCGTTCAAGGCCGACAGCCCCGCCGAGGCCTCCCTTGCATCCGACCCTCACGAGCTGCCCACCACCTCCTTTTGCCCTAACTGTATTCGCCTAAAGAAGAAGGTCCGGGAACTCCAGGCCGAGCTAGACATGCTTAAGTCTGGCACGCTTCCTGAGCCCCCSACCTTGCCAGCACAGGTACTGGAGCTCCCCGAATTCTCAGACCCCGCAGGTAAGTTGGTGTGGATGAGATTGTTGTCAGAGGGAAGAGCACGTGGTGGGCAGCGTGGAGGGGGGCCTGGAGCTCCCCAGGGGAGCCACCTTTGGGGAGACCTGGGGCGTGGAGCTTGGAGATGGGTACCGGCCGCAGCGCACGCCCTCGGGTGCCTCCGACAGGCCGCCTTACAGCTCCGGTGGGGGCTTTGGGTCTTGCCCTTGTATCCTCCTCGTCAATAA

Related Sequences

bmy_11108T0 Protein

Length: 355 aa      View alignments
>bmy_11108T0
MLHHLTFWRYVVISREEREQNLLAFQHSECIYFRACRDIRPGERLRVWYSEDYMKRLHSMSQETIHRNLARGEKKLQREKSEQALDNPEDLRGPLQLPVLRQGKSPYKRGFDEGDVHPQAKKKKIDLIFKDVLEASLESAKVEAHQLALSTSLVIRKVPKYQNDAYSQCAMTVSHGXQNVSRTQGEGDWKIPQGASKEAGPVEDEEEEPSSFKADSPAEASLASDPHELPTTSFCPNCIRLKKKVRELQAELDMLKSGTLPEPPTLPAQVLELPEFSDPAGKLVWMRLLSEGRARGGQRGGGPGAPQGSHLWGDLGRGAWRWVPAAAHALGCLRQAALQLRWGLWVLPLYPPRQ*