Part of scaffold_599 (Scaffold)

For more information consult the page for scaffold_599 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYT13 ENSTTRG00000012857 (Bottlenosed dolphin)

Gene Details

synaptotagmin XIII

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012193, Bottlenosed dolphin)

Protein Percentage 84.07%
cDNA percentage 89.05%
Ka/Ks Ratio 0.5089 (Ka = 0.1008, Ks = 0.198)

SYT13 ENSBTAG00000001703 (Cow)

Gene Details

synaptotagmin-13

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002230, Cow)

Protein Percentage 84.13%
cDNA percentage 85.02%
Ka/Ks Ratio 0.19398 (Ka = 0.1032, Ks = 0.532)

SYT13  (Minke Whale)

Gene Details

synaptotagmin XIII

External Links

Gene match (Identifier: BACU008936, Minke Whale)

Protein Percentage 86.3%
cDNA percentage 89.9%
Ka/Ks Ratio 0.47589 (Ka = 0.0922, Ks = 0.1937)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1284 bp    Location:793944..734799   Strand:-
>bmy_11109
ATGCAGAGAATGGCACGGGCTCTGACCGTGACGCACAGCTCCAGGGCACATTCATACCTGTACTCCAAGCTCAGGTCATCTACTGTCATTTCTGTGGGTGGGAACAGGCAGGAGATCCTTTCGTGGACTAATCAGAGTGATTTGTGTGTGCAGTTCAACGTCAAAAAGTCCACAGAGCCCGTTCAGCCCCGAGCCCTCCTCAAGTTCCCAGACATCTACGGCCCCAGGCCGGCTGTGACGGCCCCCGAGGTCATCAACTACGCTGACTACACGCTGAGGACCACAGAGGAGCCCGCTGCACCTGCCAGCCCCCAGGCCCCGAATGACAGCCGCCTCAAGAGGCAGGTCACAGAAGAGCTGTTGGTCCTTCCTCAGAATGGTGTGGTGCAGGATGTCTGTGTCATGGAGACTTGGAACCCAGAGAAGGCTGCCAGGTGGAACCAAGCTCCCAAACTTCACTACCGTCTAGACTACGACAGGCAAAAGGCTGAACTATTTGTGACTCGCCTGGAAGGTAYGTTCTTAGCYGACTTTCACGGCCTTCTATCTGTGACCAGTGACCATGACGGAGGCTGTGACTGCTATATCCAGGGCAGCGTGGCCAACAGGATGGGCTCCGTGGAGGCCCAGACGGCCCTGAAGAAGCGGCAGCTGCACACCACGTGGGAGGAAGGCCTCGCGCTCCCCCTGGCAGAGGGGGAGCTCCCCACAGCGACCCTGACACTGACCCTGAGGACCTGCGACCGCTTCTCTCGCCACAGTGTGGCTGGGGAGCTGCGCCTGGGCCTGGATGGCGTGTCGGTGCCTCTGGGGGCCGCCCAGTGGGGCGAGCTGAAGACTTCAGTTAAGGAGGCGTCTGCAGGAACGGGAGAGGTCCTTCTCTCCATCAGCTACCTCCCGGCTGCCAACCGCCTCCTAGTGGTGCTGATTAAGGCCAAGAACCTCCACGCTAATCAGTCCAAGGAGCTCCTGGGGAAGGATGTCTCTGTCAAGGTGACCTTGAAGCACCAGGCTCGGAAGCTGAAGAAGAAGCAGACGAAACGCGCCAAGCACAAGATCAACCCCGTGTGGAACGAGATGATCATGTTTGAGCTGCCGGATGACCTGCTGCGGGCCTCCAGTGTGGAGCTGGACGTGCTGGGCCAGGGCGCCGAGGGGCAGAGCTGCCCGCTTGGGCGCTGCAGCCTGGGCCTGCACGCCTCGGGCTCCGAACGCAGCCACTGGGAGGAGATGCTGAAGAATCCGCGCCGGCAGATCGCCATGTGGCACCAGCTGCACCTGTAG

Related Sequences

bmy_11109T0 Protein

Length: 428 aa      View alignments
>bmy_11109T0
MQRMARALTVTHSSRAHSYLYSKLRSSTVISVGGNRQEILSWTNQSDLCVQFNVKKSTEPVQPRALLKFPDIYGPRPAVTAPEVINYADYTLRTTEEPAAPASPQAPNDSRLKRQVTEELLVLPQNGVVQDVCVMETWNPEKAARWNQAPKLHYRLDYDRQKAELFVTRLEGXFLADFHGLLSVTSDHDGGCDCYIQGSVANRMGSVEAQTALKKRQLHTTWEEGLALPLAEGELPTATLTLTLRTCDRFSRHSVAGELRLGLDGVSVPLGAAQWGELKTSVKEASAGTGEVLLSISYLPAANRLLVVLIKAKNLHANQSKELLGKDVSVKVTLKHQARKLKKKQTKRAKHKINPVWNEMIMFELPDDLLRASSVELDVLGQGAEGQSCPLGRCSLGLHASGSERSHWEEMLKNPRRQIAMWHQLHL*