Sequence detailsbmy_11114 (Coding sequence)

Part of scaffold_601 (SequenceType object (1))

For more information consult the page for scaffold_601 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHRDL1ENSTTRG00000012805 (Bottlenosed dolphin)

Gene Details

chordin-like 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012152, Bottlenosed dolphin)

Protein Percentage 90.3%
cDNA percentage 91.21%
Ka/Ks Ratio 0.36692 (Ka = 0.0714, Ks = 0.1947)

CHRDL1ENSBTAG00000004432 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005810, Cow)

Protein Percentage 89.05%
cDNA percentage 89.3%
Ka/Ks Ratio 0.29781 (Ka = 0.0776, Ks = 0.2606)

CHRDL1 (Minke Whale)

Gene Details

chordin-like 1

External Links

Gene match (Identifier: BACU008994, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.69%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0097)

Additional orthologs identified in other species via the OPTIC pipeline.

CHRDL1 (Human)   Chrdl1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1209 bp    Location:865497..706288   Strand:-
Raw sequence 
>bmy_11114
ATGTGCTTTGCAGCCGAGTTAGATGTCCAAGCCTTCATTGCCTCTCTCCCGTGCATATTCCTCATCTTTGCTGCCCTCGCTGCCCAGTATCCCACAGCACGTACTTTCGAAGCTCTGCTTGTATCTATTGTTAATTTGTACACTGATGAAGACTCCTTACCCCCAGTGAACAATAAGGTGACCAGCAAGTCGTGTGAGTACAACGGGACCACTTACCAACACGGTGAGCTGTTCATGGCTGAAGGGCTCTTTCAGAACCGGCAACCCAACCAGTGCACACAGTGCAGCTGTTCGGAGGGCAATGTGTACTGTGGTCTCAAGACTTGCCCCAAGTTAACCTGTGCATTCCCAGTCTCTGTTCCTGATTCCTGCTGCCGGGTGTGCAGAGGGGATGGAGAATTGTCGTGGGAACATTCTGATGGTGATATCTTCAGGCAACCTGCCAACAGAGAAGCAAGACATTCTTACCACCGCTCGCACTATGATCCCCCACCAAGCCGACAGGCTGGAGGTCTGCCCCGCTTTCCCGGGGCCAGAAGTCACCGGGGAGCGCTCATGGATTCGCAGCAAGCGTCAGGAACCATCGTGCAGATCGTCATCAATAACAAACACAAGCATGGACAGGTGTGTGTTTCCAATGGAAAGACCTATTCCCACGGCGAGTCCTGGCACCCAAACCTCCGGGCATTTGGCATTGTGGAGTGTGTGCTGTGCACCTGTAATGTCACCAAGCAAGAGTGCAAGAAAATCCACTGCCCCAGTCGATACCCCTGCAAGTATCCTCAAAAAATAGATGGAAAGTGCTGCAAGGTGTGTCCAGAAGAACTTCCTGGCCAAAGCTTTGACAGCAAAGGCTACTTCTGTGGAGAAGAAACCATGCCCGTGTATGAGTCTGTGTTCATGGAGGATGGGGAGACCACCAGAAAAATAGCACTGGAGACAGAGAGACCGCCTCAGGTAGAGGTCCACGTTTGGACCATTCGAAAGGGCATCCTCCAGCACTTCCATATTGAGAAGATCTCCAAGAGGATGTTTGAGGAGCTCCATCACTTCAAGCTGGTGACCAGGACAACCCTGAGCCAGTGGAAGATCTTCACTGAAGGAGAAGCCCAGATCAGCCAGATGTGTTCAAGTCGTGTGTGCCGAACGGAGCTTGAAGATTTGGTCAAGGTTTTGTACCTGGAAAGGTCTGAAAAGGGCCACTGTTAG

Related Sequences

bmy_11114T0 SequenceType object (3)

Length: 403 aa      View alignments
>bmy_11114T0
MCFAAELDVQAFIASLPCIFLIFAALAAQYPTARTFEALLVSIVNLYTDEDSLPPVNNKVTSKSCEYNGTTYQHGELFMAEGLFQNRQPNQCTQCSCSEGNVYCGLKTCPKLTCAFPVSVPDSCCRVCRGDGELSWEHSDGDIFRQPANREARHSYHRSHYDPPPSRQAGGLPRFPGARSHRGALMDSQQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECKKIHCPSRYPCKYPQKIDGKCCKVCPEELPGQSFDSKGYFCGEETMPVYESVFMEDGETTRKIALETERPPQVEVHVWTIRKGILQHFHIEKISKRMFEELHHFKLVTRTTLSQWKIFTEGEAQISQMCSSRVCRTELEDLVKVLYLERSEKGHC*