Part of scaffold_592 (Scaffold)

For more information consult the page for scaffold_592 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS72 ENSTTRG00000007015 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 72 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006634, Bottlenosed dolphin)

Protein Percentage 85.5%
cDNA percentage 85.5%
Ka/Ks Ratio 0.16154 (Ka = 0.0037, Ks = 0.0228)

VPS72 ENSBTAG00000018074 (Cow)

Gene Details

Vacuolar protein sorting-associated protein 72 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024063, Cow)

Protein Percentage 99.09%
cDNA percentage 96.07%
Ka/Ks Ratio 0.04094 (Ka = 0.0057, Ks = 0.1383)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 996 bp    Location:162137..177482   Strand:+
>bmy_11122
ATGAGCTTGGCTGGGGGCCGGGCCCCCCGGAAGACCGCGGGGAACCGGCTTTCTGGGCTCCTGGAGGCAGAGGAGGAAGATGAGTTCTACCAGACGACTTATGGGGGTTTCACAGAGGAATCAGGAGATGATGAGTATCAAGGGGACCAGTCAGACACAGAGGATGAGGTGGACTCTGACTTTGACATCGACGAAGGGGATGAACCATCCAGTGATGGAGAAGCAGAAGAGCCGAGAAGGAAGCGCCGAGTAGTCACCAAAGCATATAAGGAGCCTCTGAAGAGCTTGAGGCCTCGAAAGGTCAGCACCCCAGCTGGTAGCTCTCAGAAGACCCGAGAAGAGAAGGCATTGCTTCCACTAGAACTACAGGATGATGGCTCTGACAGTCGGAAGTCCATGCGGCAATCTACAGCTGAGCACACACGACAAACATTCCTTCGGGTACAAGAGAGGCAAGGCCAGTCACGGCGGCGAAAGGGGCCCCACTGTGAGCGGCCACTGACCCAGGAGGAGCTGCTCAGGGAGGCCAAGATCACAGAGGAGCTCAACTTACGTTCACTGGAGACATATGAGCGGCTTGAGGCTGACAAAAAGAAGCAGGTCCACAAGAAGCGGAAGTGCCCTGGGCCCATAATCACCTACCATTCAGTGACAGTGCCACTAGTTGGGGAGCCAGGCCCTAAAGAAGAGAATGTCGACGTAGAAGGTGATGATGCGACGTTTGAGGAATGGTTTCCCCAAGGGCGGCCTCCAAAGATCCCTGTTCGGGAGGTCTGCCCAGTGACCCATCGCCCAGCCCTGTACCGGGACCCTGTTACAGACATACCCTACGCCACTGCTCGAGCCTTCAAGATCATCCGTGAGGCCTACAAGAAGTACATCACTGCCCACGGACTGCCGCCCACTGCTTCAGCCCTGGGCCCTGGCCCACCACCTCCTGAGCCCCTCCCTGGCTCTGGGCCCCGAGCCTTGCGCCAGAAAATTGTCATCAAATGA

Related Sequences

bmy_11122T0 Protein

Length: 332 aa      View alignments
>bmy_11122T0
MSLAGGRAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPRKVSTPAGSSQKTREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITEELNLRSLETYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEENVDVEGDDATFEEWFPQGRPPKIPVREVCPVTHRPALYRDPVTDIPYATARAFKIIREAYKKYITAHGLPPTASALGPGPPPPEPLPGSGPRALRQKIVIK*