Part of scaffold_592 (Scaffold)

For more information consult the page for scaffold_592 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCNM1 ENSTTRG00000007011 (Bottlenosed dolphin)

Gene Details

sodium channel modifier 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006630, Bottlenosed dolphin)

Protein Percentage 94.57%
cDNA percentage 95.63%
Ka/Ks Ratio 0.69244 (Ka = 0.0403, Ks = 0.0582)

SCNM1 ENSBTAG00000018070 (Cow)

Gene Details

Sodium channel modifier 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024057, Cow)

Protein Percentage 92.76%
cDNA percentage 92.61%
Ka/Ks Ratio 0.29383 (Ka = 0.0477, Ks = 0.1624)

SCNM1  (Minke Whale)

Gene Details

sodium channel modifier 1

External Links

Gene match (Identifier: BACU007245, Minke Whale)

Protein Percentage 95.48%
cDNA percentage 96.83%
Ka/Ks Ratio 1.05082 (Ka = 0.0332, Ks = 0.0316)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 666 bp    Location:185856..183274   Strand:-
>bmy_11124
ATGCATGGAAGAGCGTCCCCGGAAAAACGAAGAGTTGGGGATCTGCTGGCCAGTTATATCCCAGAGGATGAGGCGCTGATGCTACGGGATGGACGCTTTGCTTGTGCCATATGTCCCCATCGACCTGTACTGGACACTCTGGCCATGCTGACTGCCCACCGTGCAGGCAAGAAACATCTGTCCAGCCTGCAGCTTTTCTATGGCAAGAAGCAGCCGGGAAAGGGCATGGAGCAGAATCCAAGAGAGCAGAATGAACTGAGGAGGGAAGAGACCAAAGCGGAGGCTCCTCTGTTAACCCAGACTCGACTTATCACCCAGAGTGCTCTGCACAGAGCTCCTCACTATAACAGTTGCTGCCGCCGGAAGTACAGACCAGAAGCCCTTCGTCCCTCTGTCTCTCGTTCCCCTTTGCCACCCCCAGAGGTTGAACCCCAAAGTGGGAAGATCAGTAGAGAACCTGAGCCTGAGGCTGGCTCACAGACCAAGGAGTCAGCAACTGTCTCATCCCCTGCACCTATGAGCCCCACAAGAAGACGGGCCCTGGATCATTACCTCACCCTTCGAAGCTCTGGATGGATCCCAGATGGACGAGGTCGATGGGTAAAAGATGAAAATGTTGAGTTTGACTCTGATGAAGAGGAACCCCCTGATCTCCCCTTGGACTGA

Related Sequences

bmy_11124T0 Protein

Length: 222 aa      View alignments
>bmy_11124T0
MHGRASPEKRRVGDLLASYIPEDEALMLRDGRFACAICPHRPVLDTLAMLTAHRAGKKHLSSLQLFYGKKQPGKGMEQNPREQNELRREETKAEAPLLTQTRLITQSALHRAPHYNSCCRRKYRPEALRPSVSRSPLPPPEVEPQSGKISREPEPEAGSQTKESATVSSPAPMSPTRRRALDHYLTLRSSGWIPDGRGRWVKDENVEFDSDEEEPPDLPLD*